RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 NEK8Q86SG6 692 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 ZNF444Q8N0Y2 327 aaPredicted RBP30.45■■■□□ 2.46
CBX4-201ENST00000269397 ZMYND12Q9H0C1 365 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 FAM153AQ9UHL3 310 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 NFU1Q9UMS0 254 aa30.45■■■□□ 2.46
CBX4-201ENST00000269397 CARSP49589 748 aaKnown RBP30.44■■■□□ 2.46
CBX4-201ENST00000269397 ITIH3Q06033 890 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 SEMA3FQ13275 785 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 DIXDC1Q155Q3 683 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 MAN2A1Q16706 1144 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 USP17L2Q6R6M4 530 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 BLOC1S4Q9NUP1 217 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 PALM3A6NDB9 673 aaPredicted RBP30.44■■■□□ 2.46
CBX4-201ENST00000269397 LCA5LO95447 670 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 GRB10Q13322 594 aa30.44■■■□□ 2.46
CBX4-201ENST00000269397 COL22A1Q8NFW1 1626 aaPredicted RBP30.44■■■□□ 2.46
CBX4-201ENST00000269397 SHTN1A0MZ66 631 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 KAT2BQ92831 832 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 ZNF652Q9Y2D9 606 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 APBA1Q02410 837 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 EMBQ6PCB8 327 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 KRT25Q7Z3Z0 450 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 TGFBRAP1Q8WUH2 860 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 RREB1Q92766 1687 aa30.43■■■□□ 2.46
CBX4-201ENST00000269397 ERLIN2O94905 339 aa30.42■■■□□ 2.46
CBX4-201ENST00000269397 ENOX2Q16206 610 aaKnown RBP30.42■■■□□ 2.46
CBX4-201ENST00000269397 PACSIN2Q9UNF0 486 aaPredicted RBP30.42■■■□□ 2.46
CBX4-201ENST00000269397 RPS8P62241 208 aaKnown RBP30.42■■■□□ 2.46
CBX4-201ENST00000269397 CCDC43Q96MW1 224 aaKnown RBP30.42■■■□□ 2.46
CBX4-201ENST00000269397 KANSL2Q9H9L4 492 aa30.42■■■□□ 2.46
CBX4-201ENST00000269397 DOT1LQ8TEK3 1739 aa30.42■■■□□ 2.46
CBX4-201ENST00000269397 ZEB2O60315 1214 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 FTCDO95954 541 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 GUCY2FP51841 1108 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 PPARDQ03181 441 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 CCDC84Q86UT8 332 aaPredicted RBP30.41■■■□□ 2.46
CBX4-201ENST00000269397 ANKS1AQ92625 1134 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 NOX5Q96PH1 765 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 EPB41L5Q9HCM4 733 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 POTEMA6NI47 508 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 GUCY2DQ02846 1103 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 GBP6Q6ZN66 633 aa30.41■■■□□ 2.46
CBX4-201ENST00000269397 TRADDQ15628 312 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 PDXDC1Q6P996 788 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 PNMA5Q96PV4 448 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 NUDT12Q9BQG2 462 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 PPP1R2P41236 205 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 NNTQ13423 1086 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 GRIK5Q16478 980 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 HGSNATQ68CP4 663 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 MAPKAPK5Q8IW41 473 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 C6orf50Q9HD87 102 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 CPP00450 1065 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 ARID5AQ03989 594 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 KCTD19Q17RG1 926 aaPredicted RBP30.4■■■□□ 2.46
CBX4-201ENST00000269397 ASTE1Q2TB18 679 aaPredicted RBP30.4■■■□□ 2.46
CBX4-201ENST00000269397 ALS2CLQ60I27 953 aa30.4■■■□□ 2.46
CBX4-201ENST00000269397 LARP4BQ92615 738 aaKnown RBP30.4■■■□□ 2.46
CBX4-201ENST00000269397 HEXIM1O94992 359 aaKnown RBP30.39■■■□□ 2.46
CBX4-201ENST00000269397 KCNMA1Q12791 1236 aa30.39■■■□□ 2.46
CBX4-201ENST00000269397 FBXW10Q5XX13 1052 aa30.39■■■□□ 2.46
CBX4-201ENST00000269397 UNC13DQ70J99 1090 aa30.39■■■□□ 2.46
CBX4-201ENST00000269397 CAVIN3Q969G5 261 aa30.39■■■□□ 2.46
CBX4-201ENST00000269397 CDK5RAP3Q96JB5 506 aa30.39■■■□□ 2.46
CBX4-201ENST00000269397 PIGSQ96S52 555 aa30.39■■■□□ 2.46
CBX4-201ENST00000269397 UBA5Q9GZZ9 404 aa30.39■■■□□ 2.46
CBX4-201ENST00000269397 PALMO75781 387 aa30.39■■■□□ 2.45
CBX4-201ENST00000269397 CFAP221Q4G0U5 840 aa30.39■■■□□ 2.45
CBX4-201ENST00000269397 LRRC55Q6ZSA7 311 aa30.39■■■□□ 2.45
CBX4-201ENST00000269397 NDUFAB1O14561 156 aa30.38■■■□□ 2.45
CBX4-201ENST00000269397 KCNK18Q7Z418 384 aa30.38■■■□□ 2.45
CBX4-201ENST00000269397 LAMB2P55268 1798 aa30.38■■■□□ 2.45
CBX4-201ENST00000269397 PJA2O43164 708 aa30.38■■■□□ 2.45
CBX4-201ENST00000269397 SOGA3Q5TF21 947 aa30.38■■■□□ 2.45
CBX4-201ENST00000269397 IQCDQ96DY2 449 aa30.38■■■□□ 2.45
CBX4-201ENST00000269397 ZNF233A6NK53 670 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 SLC37A4O43826 429 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 EPB41P11171 864 aaKnown RBP30.37■■■□□ 2.45
CBX4-201ENST00000269397 RASA1P20936 1047 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 FAM107BQ9H098 131 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 TLR2O60603 784 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 CALCRLQ16602 461 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 RUBCNQ92622 972 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 GJA10Q969M2 543 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 UIMC1Q96RL1 719 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 KRT12Q99456 494 aa30.37■■■□□ 2.45
CBX4-201ENST00000269397 TDP2O95551 362 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 GNA11P29992 359 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 GUCY1A3Q02108 690 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 CFAP58Q5T655 872 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 TBC1D9BQ66K14 1250 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 IFT20Q8IY31 132 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 GUF1Q8N442 669 aaKnown RBP30.36■■■□□ 2.45
CBX4-201ENST00000269397 DDX12PQ92771 950 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 COBLL1Q53SF7 1204 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 REXO1Q8N1G1 1221 aaKnown RBP30.36■■■□□ 2.45
CBX4-201ENST00000269397 TBC1D7Q9P0N9 293 aa30.36■■■□□ 2.45
CBX4-201ENST00000269397 ZNF335Q9H4Z2 1342 aaPredicted RBP30.35■■■□□ 2.45
CBX4-201ENST00000269397 RNPC3Q96LT9 517 aaKnown RBP30.35■■■□□ 2.45
CBX4-201ENST00000269397 SEC63Q9UGP8 760 aaKnown RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms