RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 TACC1O75410 805 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 UBE2SQ16763 222 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 SPATA4Q8NEY3 305 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 OSBPL9Q96SU4 736 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 FGFBP2Q9BYJ0 223 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 MAGEF1Q9HAY2 307 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 JRKLQ9Y4A0 524 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 A0A1W2PQJ5 194 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 USO1O60763 962 aaKnown RBP24.58■■□□□ 1.53
CDR2-201ENST00000268383 TTC19Q6DKK2 380 aaPredicted RBP24.58■■□□□ 1.53
CDR2-201ENST00000268383 TRIM58Q8NG06 486 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 MTMR8Q96EF0 704 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 MTMR9Q96QG7 549 aa24.58■■□□□ 1.53
CDR2-201ENST00000268383 SLC1A4P43007 532 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 CACNB1Q02641 598 aaPredicted RBP24.57■■□□□ 1.52
CDR2-201ENST00000268383 DDX12PQ92771 950 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 GPCPD1Q9NPB8 672 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 MAST2Q6P0Q8 1798 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 MAGEA1P43355 309 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 NAP1L1P55209 391 aaKnown RBP24.57■■□□□ 1.52
CDR2-201ENST00000268383 SNX29Q8TEQ0 813 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 RPGRIP1Q96KN7 1286 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 RASSF4Q9H2L5 321 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 POLD4Q9HCU8 107 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 NAV1Q8NEY1 1877 aa24.57■■□□□ 1.52
CDR2-201ENST00000268383 SSBP05455 408 aaKnown RBP eCLIP24.56■■□□□ 1.52
CDR2-201ENST00000268383 TNNI2P48788 182 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 DNAJC21Q5F1R6 531 aaKnown RBP24.56■■□□□ 1.52
CDR2-201ENST00000268383 FIGNQ5HY92 759 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 UNC13DQ70J99 1090 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 BAP1Q92560 729 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 ARHGEF1Q92888 912 aaKnown RBP24.56■■□□□ 1.52
CDR2-201ENST00000268383 IVLP07476 585 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 SLURP2P0DP57 97 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 MCM3P25205 808 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 PPP4CP60510 307 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 MAN2A1Q16706 1144 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 TDRD12Q587J7 1177 aaKnown RBP24.56■■□□□ 1.52
CDR2-201ENST00000268383 C16orf86Q6ZW13 317 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 NEDD1Q8NHV4 660 aa24.56■■□□□ 1.52
CDR2-201ENST00000268383 AENQ8WTP8 325 aaKnown RBP24.56■■□□□ 1.52
CDR2-201ENST00000268383 GOLGA6BA6NDN3 693 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 CDK17Q00537 523 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 ARID5AQ03989 594 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 LRRC55Q6ZSA7 311 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 LZTS2Q9BRK4 669 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 RNASE9P60153 205 aaKnown RBP24.55■■□□□ 1.52
CDR2-201ENST00000268383 KCNMA1Q12791 1236 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 TSGA10Q9BZW7 698 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 SBF2Q86WG5 1849 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 PICALMQ13492 652 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 CACNA2D4Q7Z3S7 1137 aa24.55■■□□□ 1.52
CDR2-201ENST00000268383 TSEN2Q8NCE0 465 aaKnown RBP24.55■■□□□ 1.52
CDR2-201ENST00000268383 DDX60LQ5H9U9 1706 aaKnown RBP24.54■■□□□ 1.52
CDR2-201ENST00000268383 ZSCAN5CA6NGD5 496 aaPredicted RBP24.54■■□□□ 1.52
CDR2-201ENST00000268383 HNRNPH3P31942 346 aaKnown RBP24.54■■□□□ 1.52
CDR2-201ENST00000268383 GSTO1P78417 241 aa24.54■■□□□ 1.52
CDR2-201ENST00000268383 RBM12Q9NTZ6 932 aaKnown RBP24.54■■□□□ 1.52
CDR2-201ENST00000268383 RPS6KA4O75676 772 aa24.54■■□□□ 1.52
CDR2-201ENST00000268383 GPSM2P81274 684 aa24.54■■□□□ 1.52
CDR2-201ENST00000268383 CCDC181Q5TID7 509 aa24.54■■□□□ 1.52
CDR2-201ENST00000268383 NELFCDQ8IXH7 590 aa24.54■■□□□ 1.52
CDR2-201ENST00000268383 FNBP4Q8N3X1 1017 aaPredicted RBP24.54■■□□□ 1.52
CDR2-201ENST00000268383 RAD54LQ92698 747 aa24.54■■□□□ 1.52
CDR2-201ENST00000268383 FAM184BQ9ULE4 1060 aa24.54■■□□□ 1.52
CDR2-201ENST00000268383 PACSIN2Q9UNF0 486 aaPredicted RBP24.54■■□□□ 1.52
CDR2-201ENST00000268383 TNRC6CQ9HCJ0 1690 aaKnown RBP24.54■■□□□ 1.52
CDR2-201ENST00000268383 ESYT3A0FGR9 886 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 RPS6KA5O75582 802 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 PDHBP11177 359 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 TLR10Q9BXR5 811 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 CNTNAP4Q9C0A0 1308 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 NPHP3-ACAD11A0A0J9YXS1 232 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 DNAAF5Q86Y56 855 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 MMGT1Q8N4V1 131 aa24.53■■□□□ 1.52
CDR2-201ENST00000268383 CDK5RAP2Q96SN8 1893 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 GOLGA6CA6NDK9 693 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 GOLGA6DP0CG33 693 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 HAUS3Q68CZ6 603 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 ZNF804AQ7Z570 1209 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 GOLGA6AQ9NYA3 693 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 SLC16A2P36021 539 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 HGSNATQ68CP4 663 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 TTBK2Q6IQ55 1244 aa24.52■■□□□ 1.52
CDR2-201ENST00000268383 GUF1Q8N442 669 aaKnown RBP24.52■■□□□ 1.52
CDR2-201ENST00000268383 TRAF5O00463 557 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 TLR2O60603 784 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 UFL1O94874 794 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 PTPROQ16827 1216 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 KLHDC7AQ5VTJ3 777 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 PDXDC1Q6P996 788 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 CD209Q9NNX6 404 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 FTCDO95954 541 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 LDHCP07864 332 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 ADCY7P51828 1080 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 RHBDL3P58872 404 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 GRAPQ13588 217 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 GRAPLQ8TC17 118 aaPredicted RBP24.51■■□□□ 1.51
CDR2-201ENST00000268383 HYOU1Q9Y4L1 999 aa24.51■■□□□ 1.51
CDR2-201ENST00000268383 EP400Q96L91 3159 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms