RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 RPN1P04843 607 aaKnown RBP23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 ZNF76P36508 570 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 HSD17B4P51659 736 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 VGLL4Q14135 290 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 CLEC4DQ8WXI8 215 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 CDK5RAP3Q96JB5 506 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 PNMA5Q96PV4 448 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 RMND1Q9NWS8 449 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 PNMA2Q9UL42 364 aa23.11■■□□□ 1.29
LYSMD2-201ENST00000267838 OTOFQ9HC10 1997 aa23.1■■□□□ 1.29
LYSMD2-201ENST00000267838 GTF2F1P35269 517 aaKnown RBP eCLIP23.1■■□□□ 1.29
LYSMD2-201ENST00000267838 CT47A1Q5JQC4 288 aaPredicted RBP23.1■■□□□ 1.29
LYSMD2-201ENST00000267838 ZC3H15Q8WU90 426 aaKnown RBP23.1■■□□□ 1.29
LYSMD2-201ENST00000267838 TMOD4Q9NZQ9 345 aa23.1■■□□□ 1.29
LYSMD2-201ENST00000267838 WDR90Q96KV7 1748 aa23.1■■□□□ 1.29
LYSMD2-201ENST00000267838 GLTPD2A6NH11 291 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 VWA5AO00534 786 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 ALAS1P13196 640 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 RBM10P98175 930 aaKnown RBP23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 MCF2L2Q86YR7 1114 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 ATG4CQ96DT6 458 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 UIMC1Q96RL1 719 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 NUDT12Q9BQG2 462 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 STK17AQ9UEE5 414 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 RLFQ13129 1914 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 NFIBO00712 420 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 FAM20AQ96MK3 541 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 HSD3B7Q9H2F3 369 aa23.09■■□□□ 1.29
LYSMD2-201ENST00000267838 RBBP6Q7Z6E9 1792 aaKnown RBP23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 GRIN3BO60391 1043 aa23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 ERCC5P28715 1186 aaPredicted RBP23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 CDC25BP30305 580 aa23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 GHRHRQ02643 423 aa23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 FMR1Q06787 632 aaKnown RBP eCLIP23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 TMEM119Q4V9L6 283 aa23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 MRFAP1L1Q96HT8 127 aa23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 KCNF1Q9H3M0 494 aa23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 CSADQ9Y600 493 aa23.08■■□□□ 1.29
LYSMD2-201ENST00000267838 IGLV3-22A0A075B6J6 115 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 DSG3P32926 999 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 IREB2P48200 963 aaKnown RBP23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 AMPD3Q01432 767 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 SH3D19Q5HYK7 790 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 SPC24Q8NBT2 197 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 CYP2W1Q8TAV3 490 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 ENOX1Q8TC92 643 aaKnown RBP23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 BLOC1S4Q9NUP1 217 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 SCN4AP35499 1836 aa23.07■■□□□ 1.28
LYSMD2-201ENST00000267838 MSH4O15457 936 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 CD44P16070 742 aaKnown RBP23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 KCNB1Q14721 858 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 MUM1L1Q5H9M0 696 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 ZNF658Q5TYW1 1059 aaPredicted RBP23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 CATSPERGQ6ZRH7 1159 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 CDCA5Q96FF9 252 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 WNK4Q96J92 1243 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 C7orf25Q9BPX7 421 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 HOMER2Q9NSB8 354 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 COL11A1P12107 1806 aaPredicted RBP23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 KDM3AQ9Y4C1 1321 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 PPP1R3GB7ZBB8 358 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 SLC26A4O43511 780 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 KLRC4O43908 158 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 NF2P35240 595 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 UBXN2AP68543 259 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 SEMA3FQ13275 785 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 COG2Q14746 738 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 HYIQ5T013 277 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 SV2BQ7L1I2 683 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 SMYD4Q8IYR2 804 aaPredicted RBP23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 SAMD3Q8N6K7 520 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 LARP4BQ92615 738 aaKnown RBP23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 TRIM9Q9C026 710 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 MAP3K20Q9NYL2 800 aaKnown RBP23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 ADAMTS5Q9UNA0 930 aa23.06■■□□□ 1.28
LYSMD2-201ENST00000267838 CCT6AP40227 531 aaKnown RBP23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 SPIRE1Q08AE8 756 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 KMT5BQ4FZB7 885 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 DRC7Q8IY82 874 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 TRMT44Q8IYL2 757 aaKnown RBP23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 REPS2Q8NFH8 660 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 RAD54LQ92698 747 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 NT5C3AQ9H0P0 336 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 FANCLQ9NW38 375 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 COL20A1Q9P218 1284 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 RABGAP1Q9Y3P9 1069 aa23.05■■□□□ 1.28
LYSMD2-201ENST00000267838 RPTORQ8N122 1335 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 STAT3P40763 770 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 ECM1Q16610 540 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 TRERF1Q96PN7 1200 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 MED15Q96RN5 788 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 TAF1DQ9H5J8 278 aaPredicted RBP23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 PTPRFP10586 1907 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 IQCA1LA6NCM1 817 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 OAZ1P54368 228 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 DHX8Q14562 1220 aaKnown RBP23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 MCM6Q14566 821 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 KLHL10Q6JEL2 608 aa23.04■■□□□ 1.28
LYSMD2-201ENST00000267838 PYCARDQ9ULZ3 195 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms