RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 BCS1LQ9Y276 419 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 DUSP10Q9Y6W6 482 aa13.87□□□□□ -0.19
BEST3-201ENST00000266661 EPHB6O15197 1021 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 SRGAP2O75044 1071 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 PDHBP11177 359 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 PLCG2P16885 1265 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 TRIM21P19474 475 aaKnown RBP13.86□□□□□ -0.19
BEST3-201ENST00000266661 ATP2B4P23634 1241 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
BEST3-201ENST00000266661 PDIA5Q14554 519 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 TMEM119Q4V9L6 283 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
BEST3-201ENST00000266661 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 ARHGAP20Q9P2F6 1191 aa13.86□□□□□ -0.19
BEST3-201ENST00000266661 BIN2Q9UBW5 565 aaPredicted RBP13.86□□□□□ -0.19
BEST3-201ENST00000266661 SLC37A4O43826 429 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 EIF3JO75822 258 aaKnown RBP13.85□□□□□ -0.19
BEST3-201ENST00000266661 GPS2Q13227 327 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 VWA3BQ502W6 1294 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 SOGA3Q5TF21 947 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
BEST3-201ENST00000266661 CALML4Q96GE6 196 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 NUDT12Q9BQG2 462 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 SLC39A2Q9NP94 309 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 ZNHIT6Q9NWK9 470 aaKnown RBP13.85□□□□□ -0.19
BEST3-201ENST00000266661 PIM2Q9P1W9 311 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
BEST3-201ENST00000266661 PES1O00541 588 aaKnown RBP13.84□□□□□ -0.19
BEST3-201ENST00000266661 PRLRP16471 622 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 CLK2P49760 499 aaKnown RBP13.84□□□□□ -0.19
BEST3-201ENST00000266661 CYP27A1Q02318 531 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 ASTE1Q2TB18 679 aaPredicted RBP13.84□□□□□ -0.19
BEST3-201ENST00000266661 KIAA1328Q86T90 577 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 BAP1Q92560 729 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 MASTLQ96GX5 879 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 NDST4Q9H3R1 872 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 MTMR4Q9NYA4 1195 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 LRWD1Q9UFC0 647 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 SEC63Q9UGP8 760 aaKnown RBP13.84□□□□□ -0.19
BEST3-201ENST00000266661 ARFGEF1Q9Y6D6 1849 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 C21orf2O43822 256 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 RPS6KA5O75582 802 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 PLEKP08567 350 aaPredicted RBP13.84□□□□□ -0.19
BEST3-201ENST00000266661 TXKP42681 527 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 ITIH3Q06033 890 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 CKAP4Q07065 602 aaKnown RBP13.84□□□□□ -0.19
BEST3-201ENST00000266661 CALCRLQ16602 461 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 MAN2A1Q16706 1144 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 ZCWPW2Q504Y3 356 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 FKBP15Q5T1M5 1219 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 KCNK18Q7Z418 384 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 CREG2Q8IUH2 290 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 FAM71BQ8TC56 605 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 LARP4BQ92615 738 aaKnown RBP13.84□□□□□ -0.19
BEST3-201ENST00000266661 RAD54LQ92698 747 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 VAT1LQ9HCJ6 419 aa13.84□□□□□ -0.19
BEST3-201ENST00000266661 LTBP1Q14766 1721 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 TDP2O95551 362 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 SYF2O95926 243 aaKnown RBP13.83□□□□□ -0.2
BEST3-201ENST00000266661 NPR1P16066 1061 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 LRRC63Q05C16 580 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 PPP4R3AQ6IN85 833 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 KRT26Q7Z3Y9 468 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 MMGT1Q8N4V1 131 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 DNAJC19Q96DA6 116 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 EDEM3Q9BZQ6 932 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 TSGA10Q9BZW7 698 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 SH2D4AQ9H788 454 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 VPS18Q9P253 973 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 FAN1Q9Y2M0 1017 aa13.83□□□□□ -0.2
BEST3-201ENST00000266661 ZNF185O15231 689 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 PJA2O43164 708 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 PPP1R11O60927 126 aaPredicted RBP13.82□□□□□ -0.2
BEST3-201ENST00000266661 UFL1O94874 794 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 PRPF6O94906 941 aaKnown RBP13.82□□□□□ -0.2
BEST3-201ENST00000266661 MCM3P25205 808 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 PSMD2Q13200 908 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 ECM1Q16610 540 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 DALRD3Q5D0E6 543 aaKnown RBP13.82□□□□□ -0.2
BEST3-201ENST00000266661 HYIQ5T013 277 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 PPP1R18Q6NYC8 613 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 CCNI2Q6ZMN8 369 aaPredicted RBP13.82□□□□□ -0.2
BEST3-201ENST00000266661 ARHGAP27Q6ZUM4 889 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 TTLL6Q8N841 843 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 COA7Q96BR5 231 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 MED4Q9NPJ6 270 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 SNX12Q9UMY4 172 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 PCDHA13Q9Y5I0 950 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 HOXA10P31260 410 aaPredicted RBP13.82□□□□□ -0.2
BEST3-201ENST00000266661 ADCY7P51828 1080 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 KCNMA1Q12791 1236 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 KIF5AQ12840 1032 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 GPR162Q16538 588 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 GLIS3Q8NEA6 775 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms