RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
TIMP3-201ENST00000266085 KIF22Q14807 665 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 ENOX1Q8TC92 643 aaKnown RBP16.9■□□□□ 0.3
TIMP3-201ENST00000266085 GAP43P17677 238 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 ATP5DP30049 168 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 CCDC117Q8IWD4 279 aaPredicted RBP16.9■□□□□ 0.3
TIMP3-201ENST00000266085 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
TIMP3-201ENST00000266085 SLC10A4Q96EP9 437 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 WRNIP1Q96S55 665 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 ZHX2Q9Y6X8 837 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
TIMP3-201ENST00000266085 F5H6K3 240 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 KLRC3Q07444 240 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 WHAMMP3Q1A5X7 153 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 DCAF4Q8WV16 495 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP42Q9H9J4 1324 aaKnown RBP16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 GAS8O95995 478 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 USP17L6PQ6QN14 398 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 SH3GLB2Q9NR46 395 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 SPATA31D1Q6ZQQ2 1576 aa16.9■□□□□ 0.3
TIMP3-201ENST00000266085 TMEM191BP0C7N4 346 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 PTPREP23469 700 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 HPDP32754 393 aaPredicted RBP16.89■□□□□ 0.29
TIMP3-201ENST00000266085 RCAN1P53805 252 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 TSGA10IPQ3SY00 556 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 NEDD1Q8NHV4 660 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 NRBP1Q9UHY1 535 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 RFX5P48382 616 aaPredicted RBP16.89■□□□□ 0.29
TIMP3-201ENST00000266085 YARSP54577 528 aaKnown RBP16.89■□□□□ 0.29
TIMP3-201ENST00000266085 MXRA7P84157 204 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 SGMS1Q86VZ5 419 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 STK36Q9NRP7 1315 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 USP17L10C9JJH3 530 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 TCP1P17987 556 aaKnown RBP16.89■□□□□ 0.29
TIMP3-201ENST00000266085 SPP2Q13103 211 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 PPP2R5AQ15172 486 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 RUFY4Q6ZNE9 571 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 GIMAP7Q8NHV1 300 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 MAIP1Q8WWC4 291 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 HYOU1Q9Y4L1 999 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 INO80B-WBP1J3KQ70 363 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 TNNC2P02585 160 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 UAP1Q16222 522 aaPredicted RBP16.89■□□□□ 0.29
TIMP3-201ENST00000266085 C12orf60Q5U649 245 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 INO80BQ9C086 356 aaPredicted RBP16.89■□□□□ 0.29
TIMP3-201ENST00000266085 SAMD15Q9P1V8 674 aa16.89■□□□□ 0.29
TIMP3-201ENST00000266085 PLA2G4BP0C869 781 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 CCDC121Q6ZUS5 278 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 SND1Q7KZF4 910 aaKnown RBP eCLIP16.88■□□□□ 0.299e-10■■■■□ 22.3
TIMP3-201ENST00000266085 RETREG2Q8NC44 543 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 SLC17A8Q8NDX2 589 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 GOLGA6BA6NDN3 693 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 ORC4O43929 436 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 PTPN21Q16825 1174 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 KCNK3O14649 394 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 AKR1B1P15121 316 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 CROCCP2Q86T23 111 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 BHMT2Q9H2M3 363 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
TIMP3-201ENST00000266085 CCNE1P24864 410 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 CDC25BP30305 580 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 RCSD1Q6JBY9 416 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 PAGE5Q96GU1 130 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 DDX41Q9UJV9 622 aaKnown RBP16.87■□□□□ 0.29
TIMP3-201ENST00000266085 CLIC2O15247 247 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 RNF207Q6ZRF8 634 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 MMS19Q96T76 1030 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 STK10O94804 968 aaKnown RBP16.87■□□□□ 0.29
TIMP3-201ENST00000266085 CCND2P30279 289 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 PDE6CP51160 858 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 LONRF2Q1L5Z9 754 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 AFAP1L1Q8TED9 768 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
TIMP3-201ENST00000266085 SUGT1Q9Y2Z0 365 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 DAGLAQ9Y4D2 1042 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 AP3B2Q13367 1082 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 RASA3Q14644 834 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 FAM186BQ8IYM0 893 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 PROCA1Q8NCQ7 364 aaPredicted RBP16.87■□□□□ 0.29
TIMP3-201ENST00000266085 JPH2Q9BR39 696 aaPredicted RBP16.87■□□□□ 0.29
TIMP3-201ENST00000266085 KMT5AQ9NQR1 393 aa16.87■□□□□ 0.29
TIMP3-201ENST00000266085 ZNF215Q9UL58 517 aaPredicted RBP16.87■□□□□ 0.29
TIMP3-201ENST00000266085 BZW2Q9Y6E2 419 aaKnown RBP16.87■□□□□ 0.29
TIMP3-201ENST00000266085 UBN2Q6ZU65 1347 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 CNTNAP4Q9C0A0 1308 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms