RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 ZBED6P86452 979 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 KRT79Q5XKE5 535 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 APOBEC3HQ6NTF7 200 aaKnown RBP12.1□□□□□ -0.47
TCTN3-201ENST00000265993 UNC13DQ70J99 1090 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 NEK11Q8NG66 645 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 RAD54LQ92698 747 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 NDST4Q9H3R1 872 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 HAUS4Q9H6D7 363 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 MAGEF1Q9HAY2 307 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 PDE11AQ9HCR9 933 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 LTBP1Q14766 1721 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 TRAPPC11Q7Z392 1133 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 NELFCDQ8IXH7 590 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 CRAMP1Q96RY5 1269 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 ZNHIT6Q9NWK9 470 aaKnown RBP12.1□□□□□ -0.47
TCTN3-201ENST00000265993 ARHGAP20Q9P2F6 1191 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
TCTN3-201ENST00000265993 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 POTECB2RU33 542 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 G3V3G9 751 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 SMARCA1P28370 1054 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 ZSCAN29Q8IWY8 852 aaPredicted RBP12.09□□□□□ -0.47
TCTN3-201ENST00000265993 CRACR2AQ9BSW2 395 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 COA1Q9GZY4 146 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 RIC8AQ9NPQ8 531 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 CAPN6Q9Y6Q1 641 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 PCNTO95613 3336 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 PLIN4Q96Q06 1357 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 DDTLA6NHG4 134 aaPredicted RBP12.09□□□□□ -0.47
TCTN3-201ENST00000265993 PHACTR2O75167 634 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
TCTN3-201ENST00000265993 VWA3BQ502W6 1294 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 RRAGAQ7L523 313 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 SP8Q8IXZ3 490 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 GSPT2Q8IYD1 628 aaKnown RBP12.09□□□□□ -0.47
TCTN3-201ENST00000265993 MSANTD4Q8NCY6 345 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 NOC3LQ8WTT2 800 aaKnown RBP12.09□□□□□ -0.47
TCTN3-201ENST00000265993 CCDC42Q96M95 316 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 ERGIC2Q96RQ1 377 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 P2RX7Q99572 595 aaKnown RBP12.09□□□□□ -0.47
TCTN3-201ENST00000265993 MLXIPQ9HAP2 919 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 KIAA1024Q9UPX6 916 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 SIK3Q9Y2K2 1263 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 SAR1BQ9Y6B6 198 aa12.09□□□□□ -0.47
TCTN3-201ENST00000265993 LRRC53A6NM62 1247 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 PDE2AO00408 941 aaPredicted RBP12.08□□□□□ -0.48
TCTN3-201ENST00000265993 PSMD14O00487 310 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 ZBTB5O15062 677 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 CYLC1P35663 651 aaPredicted RBP12.08□□□□□ -0.48
TCTN3-201ENST00000265993 CLK2P49760 499 aaKnown RBP12.08□□□□□ -0.48
TCTN3-201ENST00000265993 BRD3Q15059 726 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 WHAMMP3Q1A5X7 153 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 QRICH1Q2TAL8 776 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 SLC30A10Q6XR72 485 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 FAM114A1Q8IWE2 563 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 CUL5Q93034 780 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 DNAJC19Q96DA6 116 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 ZHX3Q9H4I2 956 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 JADE2Q9NQC1 790 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 SMARCAL1Q9NZC9 954 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 RAB21Q9UL25 225 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 KRT86O43790 486 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 IPO7O95373 1038 aaKnown RBP12.08□□□□□ -0.48
TCTN3-201ENST00000265993 GDF11O95390 407 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 COASYQ13057 564 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 ENOX2Q16206 610 aaKnown RBP12.08□□□□□ -0.48
TCTN3-201ENST00000265993 USH1GQ495M9 461 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 STK17AQ9UEE5 414 aa12.08□□□□□ -0.48
TCTN3-201ENST00000265993 MAP2K7O14733 419 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 EEF2P13639 858 aaKnown RBP12.07□□□□□ -0.48
TCTN3-201ENST00000265993 CXCR5P32302 372 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 KRT83P78385 493 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 RAB34Q9BZG1 259 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 EHD2Q9NZN4 543 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 SALL4Q9UJQ4 1053 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 L1RE1Q9UN81 338 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 TRAF5O00463 557 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 MEIS1O00470 390 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
TCTN3-201ENST00000265993 SLC1A4P43007 532 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 CRKP46108 304 aa12.07□□□□□ -0.48
TCTN3-201ENST00000265993 PDIA5Q14554 519 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms