RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 C6orf163Q5TEZ5 329 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 DHX40Q8IX18 779 aaKnown RBP18.34■□□□□ 0.53
PHRF1-201ENST00000264555 MB21D1Q8N884 522 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 PARP2Q9UGN5 583 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 CRKP46108 304 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 UBXN2AP68543 259 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
PHRF1-201ENST00000264555 GDAP1L1Q96MZ0 367 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 MLXIPQ9HAP2 919 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 USTQ9Y2C2 406 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 RXRBP28702 533 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 MNAT1P51948 309 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 PODNQ7Z5L7 613 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 ACRBPQ8NEB7 543 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 CEP95Q96GE4 821 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 GDAQ9Y2T3 454 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
PHRF1-201ENST00000264555 ATP8B1O43520 1251 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 STAMBPO95630 424 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 PPP1R18Q6NYC8 613 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 NDST4Q9H3R1 872 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 C1orf112Q9NSG2 853 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 NDUFA10O95299 355 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 CD19P15391 556 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 YWHAEP62258 255 aaKnown RBP18.33■□□□□ 0.53
PHRF1-201ENST00000264555 FAM160B2Q86V87 743 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 FAM186BQ8IYM0 893 aa18.33■□□□□ 0.53
PHRF1-201ENST00000264555 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.33■□□□□ 0.52
PHRF1-201ENST00000264555 ENC1O14682 589 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 GPSM2P81274 684 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 TAF6LQ9Y6J9 622 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 MEIS1O00470 390 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 LMNB1P20700 586 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 MYL7Q01449 175 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 NFIXQ14938 502 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 AOC3Q16853 763 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 UNC13DQ70J99 1090 aa18.33■□□□□ 0.52
PHRF1-201ENST00000264555 NHEJ1Q9H9Q4 299 aaPredicted RBP18.33■□□□□ 0.52
PHRF1-201ENST00000264555 SPATA31A1Q5TZJ5 1347 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 PDE6CP51160 858 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 PPM1KQ8N3J5 372 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 RAD17O75943 681 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 KRT19P08727 400 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 C12orf60Q5U649 245 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 RTKN2Q8IZC4 609 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 ATP6V0A1Q93050 837 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 CCDC127Q96BQ5 260 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 GAS8O95995 478 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 ANTXR2P58335 489 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 ZBTB8OSQ8IWT0 167 aa18.32■□□□□ 0.52
PHRF1-201ENST00000264555 NEDD1Q8NHV4 660 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-201ENST00000264555 PRR29P0C7W0 189 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 EHHADHQ08426 723 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 PLCB1Q9NQ66 1216 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 NTSR2O95665 410 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 ATP2C1P98194 919 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-201ENST00000264555 TXNDC16Q9P2K2 825 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 AFF2P51816 1311 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 TAOK1Q7L7X3 1001 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 ACCSQ96QU6 501 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 GINS2Q9Y248 185 aa18.31■□□□□ 0.52
PHRF1-201ENST00000264555 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 CASP1P29466 404 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 ZBTB16Q05516 673 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 PAGR1Q9BTK6 254 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 CPVLQ9H3G5 476 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 TMEM206Q9H813 350 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 NDC80O14777 642 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 PRPF6O94906 941 aaKnown RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 DLATP10515 647 aaKnown RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 POLGP54098 1239 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 CCDC63Q8NA47 563 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 TRIM6Q9C030 488 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 PARVGQ9HBI0 331 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 MED4Q9NPJ6 270 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 NRBP2Q9NSY0 501 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 P4HA1P13674 534 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 ZNF408Q9H9D4 720 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 GUCY2FP51841 1108 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 POMGNT1Q8WZA1 660 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 FBXO2Q9UK22 296 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 ECM2O94769 699 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-201ENST00000264555 GH2P01242 217 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 FBF1Q8TES7 1133 aa18.3■□□□□ 0.52
PHRF1-201ENST00000264555 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-201ENST00000264555 SETDB1Q15047 1291 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 SRBD1Q8N5C6 995 aaKnown RBP18.29■□□□□ 0.52
PHRF1-201ENST00000264555 MFAP3P55082 362 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms