RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 PCDHA5Q9Y5H7 936 aa9.36□□□□□ -0.91
COPS4-201ENST00000264389 PLXNB2O15031 1838 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 A0A0G2JLL6 359 aaPredicted RBP9.35□□□□□ -0.91
COPS4-201ENST00000264389 BECN2A8MW95 431 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 GOLGA6L19H0YKK7 550 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 IRF6O14896 467 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 TBX3O15119 743 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 PLCG1P19174 1290 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 UBXN2AP68543 259 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 MDM2Q00987 491 aaPredicted RBP9.35□□□□□ -0.91
COPS4-201ENST00000264389 GHRHRQ02643 423 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 MUM1L1Q5H9M0 696 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 TREML2Q5T2D2 321 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 KRT79Q5XKE5 535 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 ISM2Q6H9L7 571 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 PRRT2Q7Z6L0 340 aaPredicted RBP9.35□□□□□ -0.91
COPS4-201ENST00000264389 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 REPS2Q8NFH8 660 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 SNX29Q8TEQ0 813 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 CUEDC2Q9H467 287 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 MAGEF1Q9HAY2 307 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 KCNMB3Q9NPA1 279 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 MAP3K20Q9NYL2 800 aaKnown RBP9.35□□□□□ -0.91
COPS4-201ENST00000264389 MYH11P35749 1972 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 RPTORQ8N122 1335 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 KDM3AQ9Y4C1 1321 aa9.35□□□□□ -0.91
COPS4-201ENST00000264389 ZNFX1Q9P2E3 1918 aaKnown RBP9.35□□□□□ -0.91
COPS4-201ENST00000264389 PLXNA1Q9UIW2 1896 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 FAM86B1E9PN63 330 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 CXCL11O14625 94 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
COPS4-201ENST00000264389 FAM86B2P0C5J1 330 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 IRX3P78415 501 aaPredicted RBP9.34□□□□□ -0.91
COPS4-201ENST00000264389 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 SETQ01105 290 aaPredicted RBP9.34□□□□□ -0.91
COPS4-201ENST00000264389 PDIA5Q14554 519 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 NT5DC1Q5TFE4 455 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 NSMFQ6X4W1 530 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 SLC30A10Q6XR72 485 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 RNF207Q6ZRF8 634 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 ETNPPLQ8TBG4 499 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 LENG9Q96B70 501 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 OPTNQ96CV9 577 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 PLIN2Q99541 437 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 TEX13BQ9BXU2 312 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 RRAGCQ9HB90 399 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 HOXC10Q9NYD6 342 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 MAN1B1Q9UKM7 699 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 ZNF214Q9UL59 606 aaPredicted RBP9.34□□□□□ -0.91
COPS4-201ENST00000264389 PCDHA12Q9UN75 941 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 ADAMTS5Q9UNA0 930 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 KCNH4Q9UQ05 1017 aa9.34□□□□□ -0.91
COPS4-201ENST00000264389 TRAF5O00463 557 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 ATP2A1O14983 1001 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 DPYDQ12882 1025 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 PLS1Q14651 629 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 TMEM132BQ14DG7 1078 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 TKFCQ3LXA3 575 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 HAUS3Q68CZ6 603 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 STAMQ92783 540 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 GJA10Q969M2 543 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 FAM20AQ96MK3 541 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 BPIFA3Q9BQP9 254 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 MMTAG2Q9BU76 263 aaKnown RBP9.34□□□□□ -0.92
COPS4-201ENST00000264389 ACAD9Q9H845 621 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 STK17AQ9UEE5 414 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.92
COPS4-201ENST00000264389 FRMPD4Q14CM0 1322 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 IGLV3-22A0A075B6J6 115 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 SOCS7O14512 581 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 MSH4O15457 936 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 MYL1P05976 194 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 CASP1P29466 404 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 SARSP49591 514 aaKnown RBP9.33□□□□□ -0.92
COPS4-201ENST00000264389 RPS6P62753 249 aaKnown RBP9.33□□□□□ -0.92
COPS4-201ENST00000264389 TPM4P67936 248 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.924e-7■■■■■ 65.4
COPS4-201ENST00000264389 GRB10Q13322 594 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 MORC3Q14149 939 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 IQCB1Q15051 598 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 NAALADL2Q58DX5 795 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 NCAPH2Q6IBW4 605 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 PLA2G4DQ86XP0 818 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 DHX40Q8IX18 779 aaKnown RBP9.33□□□□□ -0.92
COPS4-201ENST00000264389 MB21D1Q8N884 522 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 ERMNQ8TAM6 284 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 SPATA20Q8TB22 786 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 SYTL5Q8TDW5 730 aaPredicted RBP9.33□□□□□ -0.92
COPS4-201ENST00000264389 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 UIMC1Q96RL1 719 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 NT5C3AQ9H0P0 336 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 BLZF1Q9H2G9 400 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 COL20A1Q9P218 1284 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 STK24Q9Y6E0 443 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 ARID2Q68CP9 1835 aa9.33□□□□□ -0.92
COPS4-201ENST00000264389 UNCXA6NJT0 531 aa9.32□□□□□ -0.92
COPS4-201ENST00000264389 SLC26A4O43511 780 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms