RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PFKFB3Q16875 520 aaPredicted RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 SLC7A3Q8WY07 619 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 SPC25Q9HBM1 224 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 CPS1P31327 1500 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 PLA2G4BP0C869 781 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 ATP1A3P13637 1013 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 MRPS9P82933 396 aaKnown RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 FAM84BQ96KN1 310 aaPredicted RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 USP17L5A8MUK1 530 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 AFPP02771 609 aaKnown RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 HOXA13P31271 388 aaPredicted RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 GUCY2FP51841 1108 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 CLTCQ00610 1675 aaKnown RBP15.32■□□□□ 0.04
CDH3-201ENST00000264012 PPP2R5EQ16537 467 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 FAM160B2Q86V87 743 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 VSTM4Q8IW00 320 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 SLC17A8Q8NDX2 589 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 CPVLQ9H3G5 476 aa15.32■□□□□ 0.04
CDH3-201ENST00000264012 CDC27P30260 824 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 KMT5BQ4FZB7 885 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 PODNQ7Z5L7 613 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 SLC35F6Q8N357 371 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 CEP63Q96MT8 703 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 PLA2G12BQ9BX93 195 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 EMILIN3Q9NT22 766 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 TMOD1P28289 359 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 PPP2R5AQ15172 486 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 TSGA10IPQ3SY00 556 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 PARP2Q9UGN5 583 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 PLEKHG2Q9H7P9 1386 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 CLIC2O15247 247 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 IFNB1P01574 187 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 EHHADHQ08426 723 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 SEPT2Q15019 361 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 TBC1D10BQ4KMP7 808 aaPredicted RBP15.31■□□□□ 0.04
CDH3-201ENST00000264012 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 CFAP157Q5JU67 520 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 CCDC89Q8N998 374 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 BEGAINQ9BUH8 593 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 CDC23Q9UJX2 597 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 IGBP1P78318 339 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 PPARDQ03181 441 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 DALRD3Q5D0E6 543 aaKnown RBP15.31■□□□□ 0.04
CDH3-201ENST00000264012 INTS8Q75QN2 995 aaKnown RBP15.31■□□□□ 0.04
CDH3-201ENST00000264012 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 TAOK1Q7L7X3 1001 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 NT5C1BQ96P26 610 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 MMS19Q96T76 1030 aa15.31■□□□□ 0.04
CDH3-201ENST00000264012 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
CDH3-201ENST00000264012 USP42Q9H9J4 1324 aaKnown RBP15.3■□□□□ 0.04
CDH3-201ENST00000264012 CEP170P1Q96L14 293 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 MROH7-TTC4A0A0A0MT08 1334 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 UTYO14607 1347 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 SNAP25P60880 206 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 TTC31Q49AM3 519 aaPredicted RBP15.3■□□□□ 0.04
CDH3-201ENST00000264012 DENND2CQ68D51 928 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 OXER1Q8TDS5 423 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 CDHR1Q96JP9 859 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 ACCSQ96QU6 501 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 ALDH8A1Q9H2A2 487 aaPredicted RBP15.3■□□□□ 0.04
CDH3-201ENST00000264012 THAP9Q9H5L6 903 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 RABEP2Q9H5N1 569 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 ADD3Q9UEY8 706 aaKnown RBP15.3■□□□□ 0.04
CDH3-201ENST00000264012 ADAMTS13Q76LX8 1427 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 PSMD2Q13200 908 aa15.3■□□□□ 0.04
CDH3-201ENST00000264012 ASNSP08243 561 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 NSFP46459 744 aaKnown RBP15.29■□□□□ 0.04
CDH3-201ENST00000264012 NFIXQ14938 502 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 KIF2CQ99661 725 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 RAB20Q9NX57 234 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 ENC1O14682 589 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 PTK2Q05397 1052 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 SEPT14Q6ZU15 432 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 KMT5AQ9NQR1 393 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 LMNB1P20700 586 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 MFAP3P55082 362 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 GPATCH11Q8N954 259 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 ZNF579Q8NAF0 562 aaKnown RBP15.29■□□□□ 0.04
CDH3-201ENST00000264012 CEP95Q96GE4 821 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 TDRD3Q9H7E2 651 aaKnown RBP15.29■□□□□ 0.04
CDH3-201ENST00000264012 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 ZBTB5O15062 677 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 CCNA1P78396 465 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 ADAT2Q7Z6V5 191 aaKnown RBP15.29■□□□□ 0.04
CDH3-201ENST00000264012 SGMS1Q86VZ5 419 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 DCAF4Q8WV16 495 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 PPM1EQ8WY54 764 aa15.29■□□□□ 0.04
CDH3-201ENST00000264012 KRT15P19012 456 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 CTNNA1P35221 906 aaKnown RBP15.28■□□□□ 0.04
CDH3-201ENST00000264012 PIK3CAP42336 1068 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 RNF169Q8NCN4 708 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 UBN2Q6ZU65 1347 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 LACTBP83111 547 aaPredicted RBP15.28■□□□□ 0.04
CDH3-201ENST00000264012 ZBED6P86452 979 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 ITIH3Q06033 890 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 ZNF341Q9BYN7 854 aa15.28■□□□□ 0.04
CDH3-201ENST00000264012 FAM196BA6NMK8 535 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms