RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SEPT14Q6ZU15 432 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 SPRYD3Q8NCJ5 442 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 IWS1Q96ST2 819 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 MPHOSPH6Q99547 160 aaKnown RBP20.97■□□□□ 0.95
SDF4-201ENST00000263741 GLT8D2Q9H1C3 349 aa20.97■□□□□ 0.95
SDF4-201ENST00000263741 PAK6Q9NQU5 681 aaPredicted RBP20.97■□□□□ 0.95
SDF4-201ENST00000263741 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.97■□□□□ 0.95
SDF4-201ENST00000263741 FAM205CA6NFA0 338 aa20.96■□□□□ 0.95
SDF4-201ENST00000263741 CCDC85CA6NKD9 419 aa20.96■□□□□ 0.95
SDF4-201ENST00000263741 M0R2N6 131 aa20.96■□□□□ 0.95
SDF4-201ENST00000263741 CCND2P30279 289 aa20.96■□□□□ 0.95
SDF4-201ENST00000263741 AP3B2Q13367 1082 aa20.96■□□□□ 0.95
SDF4-201ENST00000263741 DAGLBQ8NCG7 672 aa20.96■□□□□ 0.95
SDF4-201ENST00000263741 BICD2Q8TD16 824 aa20.96■□□□□ 0.95
SDF4-201ENST00000263741 RGS20O76081 388 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 MMP1P03956 469 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 VSIG10LQ86VR7 867 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 VTA1Q9NP79 307 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 POTEFA5A3E0 1075 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 SEPT4O43236 478 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 ARIH2O95376 493 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 SOX10P56693 466 aa20.95■□□□□ 0.94
SDF4-201ENST00000263741 EARS2Q5JPH6 523 aaKnown RBP20.95■□□□□ 0.94
SDF4-201ENST00000263741 LOC102724159A0A0B4J2E5 919 aa20.94■□□□□ 0.94
SDF4-201ENST00000263741 FOSP01100 380 aaPredicted RBP20.94■□□□□ 0.94
SDF4-201ENST00000263741 KRT2P35908 639 aa20.94■□□□□ 0.94
SDF4-201ENST00000263741 IRX5P78411 483 aaPredicted RBP20.94■□□□□ 0.94
SDF4-201ENST00000263741 PWP2Q15269 919 aaKnown RBP20.94■□□□□ 0.94
SDF4-201ENST00000263741 PCNX4Q63HM2 1172 aa20.94■□□□□ 0.94
SDF4-201ENST00000263741 DIS3L2Q8IYB7 885 aaKnown RBP20.94■□□□□ 0.94
SDF4-201ENST00000263741 DDX20Q9UHI6 824 aaKnown RBP20.94■□□□□ 0.94
SDF4-201ENST00000263741 BTBD18B2RXH4 712 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 B4DLN1 442 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 SORBS3O60504 671 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 AKR1A1P14550 325 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 SREBF1P36956 1147 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 ARHGAP4P98171 946 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 GALNT17Q6IS24 598 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 FBXO18Q8NFZ0 1043 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 CYP2W1Q8TAV3 490 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 COPS5Q92905 334 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 EHMT1Q9H9B1 1298 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 NRBP1Q9UHY1 535 aa20.93■□□□□ 0.94
SDF4-201ENST00000263741 DNAH12Q6ZR08 3092 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 EIF3JO75822 258 aaKnown RBP20.92■□□□□ 0.94
SDF4-201ENST00000263741 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
SDF4-201ENST00000263741 SMPD1P17405 629 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 LHX8Q68G74 356 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 PIK3AP1Q6ZUJ8 805 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 U2AF1L4Q8WU68 220 aaKnown RBP20.92■□□□□ 0.94
SDF4-201ENST00000263741 UIMC1Q96RL1 719 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 TMEM106CQ9BVX2 250 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 WDR11Q9BZH6 1224 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 FAM184BQ9ULE4 1060 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 TNFAIP2Q03169 654 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 INF2Q27J81 1249 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 FAM177A1Q8N128 213 aaPredicted RBP20.92■□□□□ 0.94
SDF4-201ENST00000263741 TBCKQ8TEA7 893 aa20.92■□□□□ 0.94
SDF4-201ENST00000263741 EDIL3O43854 480 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 PGK1P00558 417 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 HSP90AA1P07900 732 aaKnown RBP20.91■□□□□ 0.94
SDF4-201ENST00000263741 GJB1P08034 283 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 ITGB5P18084 799 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 BECN1Q14457 450 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 CRYGNQ8WXF5 182 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 TNFRSF25Q93038 417 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 BRMS1Q9HCU9 246 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 PKD2L1Q9P0L9 805 aa20.91■□□□□ 0.94
SDF4-201ENST00000263741 CCDC194A0A1B0GVG4 234 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 KIF28PB7ZC32 967 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 SEMA3FQ13275 785 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 LY6KQ17RY6 165 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 SCFD2Q8WU76 684 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 INPP4AQ96PE3 977 aaPredicted RBP20.9■□□□□ 0.94
SDF4-201ENST00000263741 KIF3AQ9Y496 699 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 MRVI1Q9Y6F6 885 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 TXNP10599 105 aaKnown RBP20.9■□□□□ 0.94
SDF4-201ENST00000263741 RARBP10826 455 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 KRT25Q7Z3Z0 450 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 TEX2Q8IWB9 1127 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 INTS4Q96HW7 963 aaKnown RBP20.9■□□□□ 0.94
SDF4-201ENST00000263741 SYNRGQ9UMZ2 1314 aa20.9■□□□□ 0.94
SDF4-201ENST00000263741 MYADML2A6NDP7 307 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 FAM86B1E9PN63 330 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 FAM86B2P0C5J1 330 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 EN2P19622 333 aaPredicted RBP20.89■□□□□ 0.93
SDF4-201ENST00000263741 NONOQ15233 471 aaKnown RBP eCLIP20.89■□□□□ 0.931e-7■■■■□ 26.4
SDF4-201ENST00000263741 LARP1BQ659C4 914 aaKnown RBP20.89■□□□□ 0.93
SDF4-201ENST00000263741 BCAS3Q9H6U6 928 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 XPNPEP3Q9NQH7 507 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 UBIAD1Q9Y5Z9 338 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 RBM47A0AV96 593 aaKnown RBP20.89■□□□□ 0.93
SDF4-201ENST00000263741 CAPN15O75808 1086 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 SGPL1O95470 568 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 ZNF76P36508 570 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 SP2Q02086 613 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 SAFBQ15424 915 aaKnown RBP eCLIP20.89■□□□□ 0.93
SDF4-201ENST00000263741 CCDC62Q6P9F0 684 aa20.89■□□□□ 0.93
SDF4-201ENST00000263741 GNEQ9Y223 722 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms