RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 PITPNM2Q9BZ72 1349 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 TBX3O15119 743 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 RHOBTB3O94955 611 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 CDK11BP21127 795 aaKnown RBP17.74■□□□□ 0.43
VPS26A-201ENST00000263559 PRCPP42785 496 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 PRKG1Q13976 671 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 SUPT20HL1Q3ZLR7 823 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 C9orf131Q5VYM1 1079 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 KCNK18Q7Z418 384 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 PPP1R9AQ9ULJ8 1098 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 MAPK8IP1Q9UQF2 711 aa17.74■□□□□ 0.43
VPS26A-201ENST00000263559 PARP14Q460N5 1801 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 COBLO75128 1261 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 STAT3P40763 770 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 UBXN2AP68543 259 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 RAD54LQ92698 747 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 RAVER2Q9HCJ3 691 aaKnown RBP17.73■□□□□ 0.43
VPS26A-201ENST00000263559 MSH4O15457 936 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 CCT6AP40227 531 aaKnown RBP17.73■□□□□ 0.43
VPS26A-201ENST00000263559 ASIC1P78348 528 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 SPIRE1Q08AE8 756 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 LRMPQ12912 555 aa17.73■□□□□ 0.43
VPS26A-201ENST00000263559 CACTINQ8WUQ7 758 aaKnown RBP17.73■□□□□ 0.43
VPS26A-201ENST00000263559 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 CBFA2T2O43439 604 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 ARID5BQ14865 1188 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 HYIQ5T013 277 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 TMC6Q7Z403 805 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 CLEC4DQ8WXI8 215 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 FAM20AQ96MK3 541 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 RWDD2AQ9UIY3 292 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 PYCARDQ9ULZ3 195 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 MYMKA6NI61 221 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 NFIBO00712 420 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 USP2O75604 605 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-201ENST00000263559 HMGCS2P54868 508 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 SEMA3FQ13275 785 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 ADSSL1Q8N142 457 aa17.72■□□□□ 0.43
VPS26A-201ENST00000263559 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-201ENST00000263559 ALAS1P13196 640 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 HSD17B4P51659 736 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 PDE4DQ08499 809 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 PAK1Q13153 545 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 NELFBQ8WX92 580 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 LRRC8AQ8IWT6 810 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.71■□□□□ 0.439e-8■□□□□ 8.4
VPS26A-201ENST00000263559 IMPACTQ9P2X3 320 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 KIAA1024Q9UPX6 916 aa17.71■□□□□ 0.43
VPS26A-201ENST00000263559 KDM3AQ9Y4C1 1321 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 NOL9Q5SY16 702 aaKnown RBP17.7■□□□□ 0.42
VPS26A-201ENST00000263559 CDKAL1Q5VV42 579 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 DCPSQ96C86 337 aaKnown RBP17.7■□□□□ 0.42
VPS26A-201ENST00000263559 ZFP91Q96JP5 570 aaPredicted RBP17.7■□□□□ 0.42
VPS26A-201ENST00000263559 NT5C3AQ9H0P0 336 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 EHMT1Q9H9B1 1298 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 EXOC1Q9NV70 894 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 INTS13Q9NVM9 706 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 RLFQ13129 1914 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 POTEB3A0JP26 581 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 POTECB2RU33 542 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 ZBED4O75132 1171 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 MED24O75448 989 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 MUM1L1Q5H9M0 696 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 NCAPH2Q6IBW4 605 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 POTEBQ6S5H4 581 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 DYMQ7RTS9 669 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 C17orf53Q8N3J3 647 aaPredicted RBP17.7■□□□□ 0.42
VPS26A-201ENST00000263559 CCDC47Q96A33 483 aaKnown RBP17.7■□□□□ 0.42
VPS26A-201ENST00000263559 ATG4CQ96DT6 458 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 WNK4Q96J92 1243 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 C12orf42Q96LP6 360 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 HOMER2Q9NSB8 354 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 COL20A1Q9P218 1284 aa17.7■□□□□ 0.42
VPS26A-201ENST00000263559 ADM5C9JUS6 153 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 E9PMD0 336 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 VWA5AO00534 786 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 CTDP1Q9Y5B0 961 aaPredicted RBP17.69■□□□□ 0.42
VPS26A-201ENST00000263559 COL11A1P12107 1806 aaPredicted RBP17.69■□□□□ 0.42
VPS26A-201ENST00000263559 FCER1AP12319 257 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 STK4Q13043 487 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 PTPN21Q16825 1174 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 TPD52L1Q16890 204 aaPredicted RBP17.69■□□□□ 0.42
VPS26A-201ENST00000263559 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 KIAA1524Q8TCG1 905 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 VAV3Q9UKW4 847 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 AFG3L2Q9Y4W6 797 aa17.69■□□□□ 0.42
VPS26A-201ENST00000263559 CEP55Q53EZ4 464 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.68■□□□□ 0.42
VPS26A-201ENST00000263559 CATSPER3Q86XQ3 398 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 SULF1Q8IWU6 871 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
VPS26A-201ENST00000263559 SLC26A4O43511 780 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 SLC30A10Q6XR72 485 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 UNC13DQ70J99 1090 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 APTXQ7Z2E3 356 aaKnown RBP17.68■□□□□ 0.42
VPS26A-201ENST00000263559 VSTM4Q8IW00 320 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 DDX12PQ92771 950 aa17.68■□□□□ 0.42
VPS26A-201ENST00000263559 HPS3Q969F9 1004 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms