RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 TRMT44Q8IYL2 757 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 KIF3AQ9Y496 699 aa13.32□□□□□ -0.28
PFDN1-201ENST00000261813 ZNFX1Q9P2E3 1918 aaKnown RBP13.32□□□□□ -0.28
PFDN1-201ENST00000261813 PLXNA1Q9UIW2 1896 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 STXBP3O00186 592 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 CDKL5O76039 1030 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 CFBP00751 764 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 SCG2P13521 617 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 CYP2C19P33261 490 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 HSD17B4P51659 736 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 NBR1Q14596 966 aa13.31□□□□□ -0.28
PFDN1-201ENST00000261813 SYTL5Q8TDW5 730 aaPredicted RBP13.31□□□□□ -0.28
PFDN1-201ENST00000261813 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
PFDN1-201ENST00000261813 PPP1R3GB7ZBB8 358 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 hCG_1984214I3L0E3 225 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
PFDN1-201ENST00000261813 SSRP1Q08945 709 aaKnown RBP13.3□□□□□ -0.28
PFDN1-201ENST00000261813 MAP3K21Q5TCX8 1036 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 MAMDC4Q6UXC1 1216 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 ZNF713Q8N859 430 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-201ENST00000261813 NSUN7Q8NE18 718 aaKnown RBP13.3□□□□□ -0.28
PFDN1-201ENST00000261813 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 TINF2Q9BSI4 451 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 MAF1Q9H063 256 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 BIN2Q9UBW5 565 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-201ENST00000261813 DDX49Q9Y6V7 483 aaKnown RBP13.3□□□□□ -0.28
PFDN1-201ENST00000261813 CENPFP49454 3210 aa13.3□□□□□ -0.28
PFDN1-201ENST00000261813 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-201ENST00000261813 HRO43593 1189 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 MYCP01106 439 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-201ENST00000261813 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 HOXA13P31271 388 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-201ENST00000261813 ALDH5A1P51649 535 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-201ENST00000261813 NAPAP54920 295 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 UBXN2AP68543 259 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
PFDN1-201ENST00000261813 CACNB2Q08289 660 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-201ENST00000261813 MTFR1Q15390 333 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 C6orf132Q5T0Z8 1188 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 MFSD14CQ5VZR4 134 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
PFDN1-201ENST00000261813 TRPV1Q8NER1 839 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 TAAR1Q96RJ0 339 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 ZBED2Q9BTP6 218 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
PFDN1-201ENST00000261813 MEIS2O14770 477 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 JAK2O60674 1132 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 DEXIO95424 95 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
PFDN1-201ENST00000261813 FDPSP14324 419 aaKnown RBP13.28□□□□□ -0.28
PFDN1-201ENST00000261813 PDCP20941 246 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 PRAMEF19Q5SWL8 479 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 ARMCX2Q7L311 632 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 SAMD3Q8N6K7 520 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 UNC93B1Q9H1C4 597 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 PSTPIP2Q9H939 334 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.28□□□□□ -0.28
PFDN1-201ENST00000261813 MAP3K20Q9NYL2 800 aaKnown RBP13.28□□□□□ -0.28
PFDN1-201ENST00000261813 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 VPS9D1Q9Y2B5 631 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
PFDN1-201ENST00000261813 SMCO2A6NFE2 343 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 ASB14A6NK59 587 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 CYBAP13498 195 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 EN2P19622 333 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-201ENST00000261813 COL9A1P20849 921 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 CCND3P30281 292 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-201ENST00000261813 UBE2SQ16763 222 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 DNERQ8NFT8 737 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 MORC4Q8TE76 937 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 KATNBL1Q9H079 304 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 RIC8AQ9NPQ8 531 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-201ENST00000261813 ADD3Q9UEY8 706 aaKnown RBP13.27□□□□□ -0.29
PFDN1-201ENST00000261813 RPTORQ8N122 1335 aa13.27□□□□□ -0.29
PFDN1-201ENST00000261813 LRRC37A2A6NM11 1700 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 ESYT2A0FGR8 921 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 ZNF865P0CJ78 1059 aaPredicted RBP13.26□□□□□ -0.29
PFDN1-201ENST00000261813 CCL5P13501 91 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 EIF2AK2P19525 551 aaKnown RBP13.26□□□□□ -0.29
PFDN1-201ENST00000261813 EDNRBP24530 442 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 NUCB2P80303 420 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 CUL5Q93034 780 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 RMDN3Q96TC7 470 aa13.26□□□□□ -0.29
PFDN1-201ENST00000261813 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms