RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 KCNH4Q9UQ05 1017 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 PCDHA8Q9Y5H6 950 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 MYL3P08590 195 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 KRT76Q01546 638 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 COG2Q14746 738 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 NOLC1Q14978 699 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDH1-201ENST00000261769 C12orf60Q5U649 245 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 ARL6IP4Q66PJ3 421 aaKnown RBP15.31■□□□□ 0.04
CDH1-201ENST00000261769 CLIC4Q9Y696 253 aa15.31■□□□□ 0.04
CDH1-201ENST00000261769 HMGCS2P54868 508 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 LACTBP83111 547 aaPredicted RBP15.3■□□□□ 0.04
CDH1-201ENST00000261769 MORC3Q14149 939 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 TBC1D10CQ8IV04 446 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 SYCE1Q8N0S2 351 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 PRIMPOLQ96LW4 560 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 SCARF1Q14162 830 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 CLUL1Q15846 466 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 FAM81BQ96LP2 452 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 PARK7Q99497 189 aaKnown RBP15.3■□□□□ 0.04
CDH1-201ENST00000261769 SLIT1O75093 1534 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 KCNJ18B7U540 433 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 GADD45BO75293 160 aaPredicted RBP15.3■□□□□ 0.04
CDH1-201ENST00000261769 NR5A1Q13285 461 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 KCNJ12Q14500 433 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 SURF1Q15526 300 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 NLRC4Q9NPP4 1024 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 KIAA1210Q9ULL0 1709 aa15.3■□□□□ 0.04
CDH1-201ENST00000261769 GRM4Q14833 912 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 ZNF365Q70YC5 407 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 RRAGAQ7L523 313 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 LSM14BQ9BX40 385 aaKnown RBP15.29■□□□□ 0.04
CDH1-201ENST00000261769 MYOZ2Q9NPC6 264 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 INCENPQ9NQS7 918 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 PLEKHA8P1O95397 391 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.048e-7■■■■□ 21
CDH1-201ENST00000261769 FBXO33Q7Z6M2 555 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 ENAHQ8N8S7 591 aaPredicted RBP15.29■□□□□ 0.04
CDH1-201ENST00000261769 RAET1EQ8TD07 263 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 CCDC51Q96ER9 411 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 VAV2P52735 878 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 SNAP25P60880 206 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
CDH1-201ENST00000261769 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 WDR46O15213 610 aaKnown RBP15.29■□□□□ 0.04
CDH1-201ENST00000261769 HUNKP57058 714 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 PFKFB3Q16875 520 aaPredicted RBP15.29■□□□□ 0.04
CDH1-201ENST00000261769 PPM1KQ8N3J5 372 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 GPR161Q8N6U8 529 aaKnown RBP15.29■□□□□ 0.04
CDH1-201ENST00000261769 ZNF280CQ8ND82 737 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 MCPH1Q8NEM0 835 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 CCDC94Q9BW85 323 aaPredicted RBP15.29■□□□□ 0.04
CDH1-201ENST00000261769 ZFYVE28Q9HCC9 887 aa15.29■□□□□ 0.04
CDH1-201ENST00000261769 RGL2O15211 777 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 ABL1P00519 1130 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 AKR1B1P15121 316 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 TDRD7Q8NHU6 1098 aaKnown RBP15.28■□□□□ 0.04
CDH1-201ENST00000261769 FAM20AQ96MK3 541 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 KDM6AO15550 1401 aaPredicted RBP15.28■□□□□ 0.04
CDH1-201ENST00000261769 HS1BP3Q53T59 392 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 KCNV1Q6PIU1 500 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 NT5C1BQ96P26 610 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 USTQ9Y2C2 406 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 PTPREP23469 700 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 ANKRD13AQ8IZ07 590 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 DHTKD1Q96HY7 919 aaPredicted RBP15.28■□□□□ 0.04
CDH1-201ENST00000261769 GINM1Q9NU53 330 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 PSMC2P35998 433 aaKnown RBP15.28■□□□□ 0.04
CDH1-201ENST00000261769 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 SPECC1LQ69YQ0 1117 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 NEK9Q8TD19 979 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 MAIP1Q8WWC4 291 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 CAPZA3Q96KX2 299 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 FAM49AQ9H0Q0 323 aaPredicted RBP15.28■□□□□ 0.04
CDH1-201ENST00000261769 ZKSCAN5Q9Y2L8 839 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
CDH1-201ENST00000261769 NDC80O14777 642 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 SPATA1Q5VX52 437 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 CATSPER4Q7RTX7 472 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 TIGD1Q96MW7 591 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 ZBED2Q9BTP6 218 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 TEX13BQ9BXU2 312 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 NEDD4P46934 1319 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 K7ERI5 159 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 PLSCR1O15162 318 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 SFNP31947 248 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 PDE6CP51160 858 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 ORC2Q13416 577 aaPredicted RBP15.27■□□□□ 0.04
CDH1-201ENST00000261769 CUL4AQ13619 759 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 CDC42EP5Q6NZY7 148 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
CDH1-201ENST00000261769 ARHGAP6O43182 974 aa15.27■□□□□ 0.03
CDH1-201ENST00000261769 SLFN14P0C7P3 912 aa15.27■□□□□ 0.03
CDH1-201ENST00000261769 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.03
CDH1-201ENST00000261769 QRICH1Q2TAL8 776 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms