RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 GCNT3O95395 438 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 LSP1P33241 339 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 RFC4P35249 363 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 TAF11Q15544 211 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 ZNF473Q8WTR7 871 aaKnown RBP17.73■□□□□ 0.43
SREBF1-201ENST00000261646 RAB3IPQ96QF0 476 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-201ENST00000261646 TPX2Q9ULW0 747 aaKnown RBP17.73■□□□□ 0.43
SREBF1-201ENST00000261646 PPLO60437 1756 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 LRRC53A6NM62 1247 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 LUC7L3O95232 432 aaKnown RBP17.73■□□□□ 0.43
SREBF1-201ENST00000261646 RASSF2P50749 326 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 ADCY7P51828 1080 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 ANTXR2P58335 489 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 GPBP1Q86WP2 473 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 THOC1Q96FV9 657 aaKnown RBP17.73■□□□□ 0.43
SREBF1-201ENST00000261646 CNOT10Q9H9A5 744 aaKnown RBP17.73■□□□□ 0.43
SREBF1-201ENST00000261646 PANK4Q9NVE7 773 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 LIMA1Q9UHB6 759 aaKnown RBP17.73■□□□□ 0.43
SREBF1-201ENST00000261646 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 PTPRUQ92729 1446 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 ATG9AQ7Z3C6 839 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 NLRP10Q86W26 655 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 CEP63Q96MT8 703 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 EPN3Q9H201 632 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 CUEDC2Q9H467 287 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 CAPN11Q9UMQ6 739 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 EIF4E1BA6NMX2 242 aaKnown RBP17.72■□□□□ 0.43
SREBF1-201ENST00000261646 HIBADHP31937 336 aaKnown RBP17.72■□□□□ 0.43
SREBF1-201ENST00000261646 EXOC3L4Q17RC7 722 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 TTLL11Q8NHH1 800 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 LARP4BQ92615 738 aaKnown RBP17.72■□□□□ 0.43
SREBF1-201ENST00000261646 PDE6BP35913 854 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 DYNLL1P63167 89 aaKnown RBP17.72■□□□□ 0.43
SREBF1-201ENST00000261646 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 SENP2Q9HC62 589 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 NOP53Q9NZM5 478 aaKnown RBP17.72■□□□□ 0.43
SREBF1-201ENST00000261646 MMEP08473 750 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 MDH1P40925 334 aaKnown RBP17.72■□□□□ 0.43
SREBF1-201ENST00000261646 FOXO4P98177 505 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 GBP5Q96PP8 586 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 CD248Q9HCU0 757 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 ADGRB2O60241 1585 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 ERVK-24P63145 666 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 ANKRD20A3Q5VUR7 823 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 HAUS3Q68CZ6 603 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 NEK9Q8TD19 979 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 MS4A14Q96JA4 679 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 PCDHA4Q9UN74 947 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 PCDHA12Q9UN75 941 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 HPS5Q9UPZ3 1129 aa17.72■□□□□ 0.43
SREBF1-201ENST00000261646 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 CUL1Q13616 776 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
SREBF1-201ENST00000261646 SPDL1Q96EA4 605 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 DDX47Q9H0S4 455 aaKnown RBP17.71■□□□□ 0.43
SREBF1-201ENST00000261646 YY1AP1Q9H869 796 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 DNM3Q9UQ16 869 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.43
SREBF1-201ENST00000261646 SHPRHQ149N8 1683 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 DEPDC5O75140 1603 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 PP2D1A8MPX8 630 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 SERPING1P05155 500 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 MYL1P05976 194 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 SGMS1Q86VZ5 419 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 SAAL1Q96ER3 474 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 HAUS2Q9NVX0 235 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.71■□□□□ 0.43
SREBF1-201ENST00000261646 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
SREBF1-201ENST00000261646 PSMD14O00487 310 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 GAS8O95995 478 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 PTPAQ15257 358 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 PBKQ96KB5 322 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 ZIM3Q96PE6 472 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 YIPF3Q9GZM5 350 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
SREBF1-201ENST00000261646 A0A1W2PQC6 194 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 PPP2R2AP63151 447 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-201ENST00000261646 BIRC3Q13489 604 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 RASGRF1Q13972 1273 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 ARL6IP4Q66PJ3 421 aaKnown RBP17.7■□□□□ 0.42
SREBF1-201ENST00000261646 NUGGCQ68CJ6 796 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 FOXP4Q8IVH2 680 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-201ENST00000261646 CCDC13Q8IYE1 715 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 C8orf37Q96NL8 207 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 HPSEQ9Y251 543 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 UBE2Q2LH0YL09 131 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 CHMP2AO43633 222 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 EXOC3O60645 756 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 CHRNDQ07001 517 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 CAPN12Q6ZSI9 719 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 MAPKAPK5Q8IW41 473 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 COL4A3BPQ9Y5P4 624 aa17.7■□□□□ 0.42
SREBF1-201ENST00000261646 RIMBP2O15034 1052 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms