RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 VPS52Q8N1B4 723 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 NBPF3Q9H094 633 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 Q9H521 79 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 RNF8O76064 485 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 CA4P22748 312 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 PAX3P23760 479 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 MAGEA1P43355 309 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 NEDD9Q14511 834 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 SLMAPQ14BN4 828 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC6Q16204 474 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 FAM98CQ17RN3 349 aaKnown RBP4.71□□□□□ -1.66
VPS13C-202ENST00000261517 ALS2CLQ60I27 953 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 NCAPH2Q6IBW4 605 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 SP8Q8IXZ3 490 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 GBP7Q8N8V2 638 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-202ENST00000261517 STMN2Q93045 179 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 FOXP3Q9BZS1 431 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 MLXIPQ9HAP2 919 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 VCX3AQ9NNX9 186 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 GUCA1BQ9UMX6 200 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 PCDHA1Q9Y5I3 950 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 PDIA3P30101 505 aaKnown RBP4.71□□□□□ -1.66
VPS13C-202ENST00000261517 RSRC1Q96IZ7 334 aaKnown RBP4.71□□□□□ -1.66
VPS13C-202ENST00000261517 LMBRD1Q9NUN5 540 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 BRPF3Q9ULD4 1205 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L12C9JPN9 530 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L21D6R901 530 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 XRCC6P12956 609 aaKnown RBP eCLIP4.71□□□□□ -1.66
VPS13C-202ENST00000261517 DEUP1Q05D60 604 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 FMN2Q9NZ56 1722 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 TIMM10P62072 90 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 DRP2Q13474 957 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 STILQ15468 1287 aa4.71□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC188H7C350 402 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 BMP3P12645 472 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 RNF187Q5TA31 235 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 LRCH2Q5VUJ6 765 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 G2E3Q7L622 706 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 TRMT1Q9NXH9 659 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SLC8A2Q9UPR5 921 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 MON2Q7Z3U7 1717 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ANXA1P04083 346 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L2Q6R6M4 530 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 DDX23Q9BUQ8 820 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 RBSNQ9H1K0 784 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 CBX8Q9HC52 389 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PPP2R3BQ9Y5P8 575 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 RNF40O75150 1001 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 POLGP54098 1239 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 EXOC3L4Q17RC7 722 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SMAP1Q8IYB5 467 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 UTYO14607 1347 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PARP4Q9UKK3 1724 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 CRCPO75575 148 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 EFNA5P52803 228 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SLC12A2P55011 1212 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PLA2G4DQ86XP0 818 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 DHX38Q92620 1227 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 CTTNBP2NLQ9P2B4 639 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 MYO5BQ9ULV0 1848 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ADGRB1O14514 1584 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 H2AFZP0C0S5 128 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PFKFB1P16118 471 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 COG7P83436 770 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ARHGAP4P98171 946 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 RABL6Q3YEC7 729 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 STYK1Q6J9G0 422 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SYDE1Q6ZW31 735 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 H2AFVQ71UI9 128 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 TRIM50Q86XT4 487 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 FAM71BQ8TC56 605 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PARVGQ9HBI0 331 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 AKAP12Q02952 1782 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SPEF2Q9C093 1822 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 AFPP02771 609 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SERPINB2P05120 415 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 GOLGA8FQ08AF8 430 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 GOLGA8DPQ0D2H9 430 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 KCNB1Q14721 858 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ARL13BQ3SXY8 428 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SBK1Q52WX2 424 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 SMYD5Q6GMV2 418 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 C4orf22Q6V702 233 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 TADA2BQ86TJ2 420 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF341Q9BYN7 854 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ZSWIM4Q9H7M6 989 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 THEGQ9P2T0 379 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 A1BGP04217 495 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PDIA5Q14554 519 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 RSAD2Q8WXG1 361 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 DDX50Q9BQ39 737 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 C19orf81C9J6K1 198 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 TXKP42681 527 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 NSFP46459 744 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 DUOX1Q9NRD9 1551 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 MTMR6Q9Y217 621 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PODXLO00592 558 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 PLCB4Q15147 1175 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ME3Q16798 604 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 LMNTD2Q8IXW0 634 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms