RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 FAM129AQ9BZQ8 928 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 FAM117AQ9C073 453 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 SERHL2Q9H4I8 314 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 CHST12Q9NRB3 414 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TCP11L1Q9NUJ3 509 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 HAUS2Q9NVX0 235 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 SCHIP1Q9P0W5 487 aaPredicted RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 BAIAP2L1Q9UHR4 511 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 IVNS1ABPQ9Y6Y0 642 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TRIM64A6NGJ6 449 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TRIM64BA6NI03 449 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 PLSCR1O15162 318 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 GNPATO15228 680 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ZW10O43264 779 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 DGKIO75912 1065 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 POLR2EP19388 210 aaKnown RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 HSD17B2P37059 387 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TXLNAP40222 546 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TBL3Q12788 808 aaKnown RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TNNI3KQ59H18 835 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 CORO6Q6QEF8 472 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 VPS36Q86VN1 386 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 PLA2G4DQ86XP0 818 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 IL1RAPL1Q9NZN1 696 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ABCA8O94911 1581 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ATP10AO60312 1499 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 KIF28PB7ZC32 967 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 CDC45O75419 566 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 MYL6BP14649 208 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 TMOD1P28289 359 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 KIF5AQ12840 1032 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 CASP8Q14790 479 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 CEP78Q5JTW2 689 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 ZNF598Q86UK7 904 aaKnown RBP8.46□□□□□ -1.05
GPNMB-201ENST00000258733 IFNL1Q8IU54 200 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 MXD3Q9BW11 206 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 UBN1Q9NPG3 1134 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.46□□□□□ -1.05
GPNMB-201ENST00000258733 MOCS1Q9NZB8 636 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 ARAP3Q8WWN8 1544 aa8.46□□□□□ -1.05
GPNMB-201ENST00000258733 MED1Q15648 1581 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-201ENST00000258733 A0A0J9YVX5 310 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 OPLAHO14841 1288 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 URI1O94763 535 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-201ENST00000258733 BAIAP3O94812 1187 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 CDK4P11802 303 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 AARSP49588 968 aaKnown RBP eCLIP8.46□□□□□ -1.06
GPNMB-201ENST00000258733 CD83Q01151 205 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 PPFIA1Q13136 1202 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 ARMC4Q5T2S8 1044 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 DEPDC1Q5TB30 811 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 CCDC81Q6ZN84 652 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 LINS1Q8NG48 757 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 OSCP1Q8WVF1 389 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 RSAD2Q8WXG1 361 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 CFAP36Q96G28 342 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 JPH4Q96JJ6 628 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 PRAM1Q96QH2 718 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 PLVAPQ9BX97 442 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 CYLDQ9NQC7 956 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 MOSPD1Q9UJG1 213 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 CFL2Q9Y281 166 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 RABGAP1Q9Y3P9 1069 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 PTPRTO14522 1441 aa8.46□□□□□ -1.06
GPNMB-201ENST00000258733 KIF24Q5T7B8 1368 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 GRIN2DO15399 1336 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 INMTO95050 263 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 IDEP14735 1019 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 MZF1P28698 734 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 EVI2BP34910 448 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 COPAP53621 1224 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 XRCC4Q13426 336 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 WDR44Q5JSH3 913 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 ATL3Q6DD88 541 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 SIGIRRQ6IA17 410 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 C1orf228Q6PIY5 440 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 ITPRIPQ8IWB1 547 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 IGSF22Q8N9C0 903 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 HERVK_113Q902F9 699 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 BRF1Q92994 677 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 SNF8Q96H20 258 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 RBM42Q9BTD8 480 aaKnown RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 TTPALQ9BTX7 342 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 EHD4Q9H223 541 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 CARD9Q9H257 536 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 PLEKHA5Q9HAU0 1116 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 CCDC177Q9NQR7 707 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 RASAL2Q9UJF2 1139 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 H0YC42 278 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 RNGTTO60942 597 aaKnown RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 CYP2C9P11712 490 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 GSTT1P30711 240 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 TUBP50607 506 aa8.45□□□□□ -1.06
GPNMB-201ENST00000258733 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 TPD52P55327 224 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
GPNMB-201ENST00000258733 ETF1P62495 437 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms