RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PEX26Q7Z412 305 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 SLC44A5Q8NCS7 719 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 IQCGQ9H095 443 aaKnown RBP16.47■□□□□ 0.23
UBE4B-201ENST00000253251 AGTPBP1Q9UPW5 1226 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 FLT1P17948 1338 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 KRT19P08727 400 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 FERP16591 822 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 CBX1P83916 185 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 MCM6Q14566 821 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 WHAMMP3Q1A5X7 153 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 IFT20Q8IY31 132 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 SPON1Q9HCB6 807 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 GINM1Q9NU53 330 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 SERPINA10Q9UK55 444 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 USP11P51784 963 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 ADKP55263 362 aaKnown RBP16.47■□□□□ 0.23
UBE4B-201ENST00000253251 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 RDH13Q8NBN7 331 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
UBE4B-201ENST00000253251 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 SLC26A4O43511 780 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 RPS12P25398 132 aaKnown RBP16.47■□□□□ 0.23
UBE4B-201ENST00000253251 ARHGAP44Q17R89 818 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 UTP14CQ5TAP6 766 aaKnown RBP16.47■□□□□ 0.23
UBE4B-201ENST00000253251 KIF2CQ99661 725 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 MXD3Q9BW11 206 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 AP5M1Q9H0R1 490 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 PVALEFA0A1B0GWK0 134 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 CCDC117Q8IWD4 279 aaPredicted RBP16.46■□□□□ 0.23
UBE4B-201ENST00000253251 POMGNT1Q8WZA1 660 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 CEP170P1Q96L14 293 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 SUGCTQ9HAC7 445 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 C3P01024 1663 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 GPR75-ASB3A0A0A6YYF3 556 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 LONRF3Q496Y0 759 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 PGBD1Q96JS3 809 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 AMFRQ9UKV5 643 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 ECM2O94769 699 aaPredicted RBP16.46■□□□□ 0.23
UBE4B-201ENST00000253251 AFPP02771 609 aaKnown RBP16.46■□□□□ 0.23
UBE4B-201ENST00000253251 RHOXF2BP0C7M4 288 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 TMEM191BP0C7N4 346 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 TBC1D10BQ4KMP7 808 aaPredicted RBP16.46■□□□□ 0.23
UBE4B-201ENST00000253251 C16orf86Q6ZW13 317 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 FAM186BQ8IYM0 893 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 WRNIP1Q96S55 665 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 RHOXF2Q9BQY4 288 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 KMT5AQ9NQR1 393 aa16.46■□□□□ 0.23
UBE4B-201ENST00000253251 HNRNPDLO14979 420 aaKnown RBP16.46■□□□□ 0.22
UBE4B-201ENST00000253251 SURF1Q15526 300 aa16.46■□□□□ 0.22
UBE4B-201ENST00000253251 UNC13DQ70J99 1090 aa16.46■□□□□ 0.22
UBE4B-201ENST00000253251 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.22
UBE4B-201ENST00000253251 MYO1AQ9UBC5 1043 aa16.46■□□□□ 0.22
UBE4B-201ENST00000253251 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 H2AFZP0C0S5 128 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 KRT76Q01546 638 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 ZNF365Q70YC5 407 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 H2AFVQ71UI9 128 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 GJA10Q969M2 543 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 MTMR4Q9NYA4 1195 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 MFAP3P55082 362 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 CCDC114Q96M63 670 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
UBE4B-201ENST00000253251 UTP11Q9Y3A2 253 aaKnown RBP16.45■□□□□ 0.22
UBE4B-201ENST00000253251 MYOM1P52179 1685 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
UBE4B-201ENST00000253251 PDE6CP51160 858 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
UBE4B-201ENST00000253251 C2orf69Q8N8R5 385 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 LPAR1Q92633 364 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 NT5C1BQ96P26 610 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 BPIFA3Q9BQP9 254 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 PPP2R2CQ9Y2T4 447 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 AKR1B1P15121 316 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 ATP5DP30049 168 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 CHRNA5P30532 468 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 ZNF354CQ86Y25 554 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 NSUN6Q8TEA1 469 aaKnown RBP16.45■□□□□ 0.22
UBE4B-201ENST00000253251 U2AF1L4Q8WU68 220 aaKnown RBP16.45■□□□□ 0.22
UBE4B-201ENST00000253251 EPSTI1Q96J88 318 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
UBE4B-201ENST00000253251 EPN1Q9Y6I3 576 aaPredicted RBP16.45■□□□□ 0.22
UBE4B-201ENST00000253251 ZEB2O60315 1214 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 STK10O94804 968 aaKnown RBP16.44■□□□□ 0.22
UBE4B-201ENST00000253251 TCP1P17987 556 aaKnown RBP16.44■□□□□ 0.22
UBE4B-201ENST00000253251 ETF1P62495 437 aaKnown RBP16.44■□□□□ 0.22
UBE4B-201ENST00000253251 UBXN2AP68543 259 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 MYL7Q01449 175 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 C11orf57Q6ZUT1 292 aaPredicted RBP16.44■□□□□ 0.22
UBE4B-201ENST00000253251 IFT81Q8WYA0 676 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 KCNB2Q92953 911 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
UBE4B-201ENST00000253251 PABPN1LA6NDY0 278 aaKnown RBP16.44■□□□□ 0.22
UBE4B-201ENST00000253251 LMNB1P20700 586 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms