RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 OPLAHO14841 1288 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 SGSM2O43147 1006 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 ACTN1P12814 892 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 LAMC2Q13753 1193 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 DGKDQ16760 1214 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 STOX1Q6ZVD7 989 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 DEFB128Q7Z7B8 93 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 PPP1R13LQ8WUF5 828 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 VWCEQ96DN2 955 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 RIOX1Q9H6W3 641 aa24.45■■□□□ 1.5
NEDD8-201ENST00000250495 PPP1R11O60927 126 aaPredicted RBP24.44■■□□□ 1.5
NEDD8-201ENST00000250495 IQCF3P0C7M6 154 aa24.44■■□□□ 1.5
NEDD8-201ENST00000250495 IRX6P78412 446 aaPredicted RBP24.44■■□□□ 1.5
NEDD8-201ENST00000250495 PTGISQ16647 500 aa24.44■■□□□ 1.5
NEDD8-201ENST00000250495 KCNV1Q6PIU1 500 aa24.44■■□□□ 1.5
NEDD8-201ENST00000250495 SESTD1Q86VW0 696 aa24.44■■□□□ 1.5
NEDD8-201ENST00000250495 HOMER1Q86YM7 354 aa24.44■■□□□ 1.5
NEDD8-201ENST00000250495 EMID1Q96A84 441 aaPredicted RBP24.44■■□□□ 1.5
NEDD8-201ENST00000250495 NKX2-4Q9H2Z4 354 aa24.44■■□□□ 1.5
NEDD8-201ENST00000250495 PRDM12Q9H4Q4 367 aa24.44■■□□□ 1.5
NEDD8-201ENST00000250495 CDH23Q9H251 3354 aa24.43■■□□□ 1.5
NEDD8-201ENST00000250495 MYCLP12524 364 aaPredicted RBP24.43■■□□□ 1.5
NEDD8-201ENST00000250495 CATIPQ7Z7H3 387 aa24.43■■□□□ 1.5
NEDD8-201ENST00000250495 CCDC155Q8N6L0 562 aa24.43■■□□□ 1.5
NEDD8-201ENST00000250495 MAP4K1Q92918 833 aa24.43■■□□□ 1.5
NEDD8-201ENST00000250495 PIGSQ96S52 555 aa24.43■■□□□ 1.5
NEDD8-201ENST00000250495 PDCD2LQ9BRP1 358 aa24.43■■□□□ 1.5
NEDD8-201ENST00000250495 PCDHA11Q9Y5I1 949 aa24.43■■□□□ 1.5
NEDD8-201ENST00000250495 UNC80Q8N2C7 3258 aa24.42■■□□□ 1.5
NEDD8-201ENST00000250495 BAZ2BQ9UIF8 2168 aaKnown RBP24.42■■□□□ 1.5
NEDD8-201ENST00000250495 GCOM1H8Y6P7 765 aaPredicted RBP24.42■■□□□ 1.5
NEDD8-201ENST00000250495 POLR2MP0CAP2 368 aa24.42■■□□□ 1.5
NEDD8-201ENST00000250495 ATP2A2P16615 1042 aaKnown RBP24.42■■□□□ 1.5
NEDD8-201ENST00000250495 TROAPQ12815 778 aa24.42■■□□□ 1.5
NEDD8-201ENST00000250495 VSIG10LQ86VR7 867 aa24.42■■□□□ 1.5
NEDD8-201ENST00000250495 DHX37Q8IY37 1157 aaKnown RBP24.42■■□□□ 1.5
NEDD8-201ENST00000250495 CAGE1Q8TC20 777 aa24.42■■□□□ 1.5
NEDD8-201ENST00000250495 KAT2BQ92831 832 aa24.42■■□□□ 1.5
NEDD8-201ENST00000250495 KATNAL1Q9BW62 490 aa24.42■■□□□ 1.5
NEDD8-201ENST00000250495 YBX2Q9Y2T7 364 aaKnown RBP24.42■■□□□ 1.5
NEDD8-201ENST00000250495 PNMA6FA0A0J9YX94 578 aa24.41■■□□□ 1.5
NEDD8-201ENST00000250495 HOXA13P31271 388 aaPredicted RBP24.41■■□□□ 1.5
NEDD8-201ENST00000250495 RABGGTBP53611 331 aa24.41■■□□□ 1.5
NEDD8-201ENST00000250495 TMEM67Q5HYA8 995 aa24.41■■□□□ 1.5
NEDD8-201ENST00000250495 PPTC7Q8NI37 304 aa24.41■■□□□ 1.5
NEDD8-201ENST00000250495 FTOQ9C0B1 505 aaKnown RBP eCLIP24.41■■□□□ 1.57e-7■■□□□ 13.4
NEDD8-201ENST00000250495 SENP2Q9HC62 589 aa24.41■■□□□ 1.5
NEDD8-201ENST00000250495 MYH7BA7E2Y1 1941 aa24.41■■□□□ 1.5
NEDD8-201ENST00000250495 SCN5AQ14524 2016 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 TGFB3P10600 412 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 PGM5Q15124 567 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 SLC35G1Q2M3R5 365 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 C7orf31Q8N865 590 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 IGDCC4Q8TDY8 1250 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 AFAP1L1Q8TED9 768 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 TAF6LQ9Y6J9 622 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 GBF1Q92538 1859 aa24.4■■□□□ 1.5
NEDD8-201ENST00000250495 TRIP12Q14669 1992 aaPredicted RBP24.4■■□□□ 1.5
NEDD8-201ENST00000250495 CYTH3O43739 400 aa24.39■■□□□ 1.49
NEDD8-201ENST00000250495 PPFIA4O75335 1185 aa24.39■■□□□ 1.49
NEDD8-201ENST00000250495 PSEN2P49810 448 aa24.39■■□□□ 1.49
NEDD8-201ENST00000250495 GDF6Q6KF10 455 aaPredicted RBP24.39■■□□□ 1.49
NEDD8-201ENST00000250495 PHOSPHO2Q8TCD6 241 aa24.39■■□□□ 1.49
NEDD8-201ENST00000250495 SYMPKQ92797 1274 aaKnown RBP24.39■■□□□ 1.49
NEDD8-201ENST00000250495 RGS20O76081 388 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 CCND2P30279 289 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 MYSM1Q5VVJ2 828 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 PPP2R2DQ66LE6 453 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 FCHSD1Q86WN1 690 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 USP38Q8NB14 1042 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 SLC9A7Q96T83 725 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 MAP3K14Q99558 947 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 ALG1Q9BT22 464 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 MTA3Q9BTC8 594 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 HDAC6Q9UBN7 1215 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 GTF2IRD1Q9UHL9 959 aa24.38■■□□□ 1.49
NEDD8-201ENST00000250495 RBM8AQ9Y5S9 174 aaKnown RBP24.38■■□□□ 1.49
NEDD8-201ENST00000250495 PARNO95453 639 aaKnown RBP24.37■■□□□ 1.49
NEDD8-201ENST00000250495 IGFBP4P22692 258 aa24.37■■□□□ 1.49
NEDD8-201ENST00000250495 ANTXR2P58335 489 aa24.37■■□□□ 1.49
NEDD8-201ENST00000250495 MFSD10Q14728 455 aa24.37■■□□□ 1.49
NEDD8-201ENST00000250495 CELF3Q5SZQ8 465 aaKnown RBP24.37■■□□□ 1.49
NEDD8-201ENST00000250495 MB21D2Q8IYB1 491 aaPredicted RBP24.37■■□□□ 1.49
NEDD8-201ENST00000250495 PPM1EQ8WY54 764 aa24.37■■□□□ 1.49
NEDD8-201ENST00000250495 HAS3O00219 553 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 F2P00734 622 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 MYOGP15173 224 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 SELPP16109 830 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 ADGRE1Q14246 886 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 KIAA0753Q2KHM9 967 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 CASC1Q6TDU7 716 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 TMTC2Q8N394 836 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 CTCFLQ8NI51 663 aaPredicted RBP24.36■■□□□ 1.49
NEDD8-201ENST00000250495 SPATA33Q96N06 139 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 CTAGE1Q96RT6 745 aa24.36■■□□□ 1.49
NEDD8-201ENST00000250495 KIF28PB7ZC32 967 aa24.35■■□□□ 1.49
NEDD8-201ENST00000250495 BAIAP3O94812 1187 aa24.35■■□□□ 1.49
NEDD8-201ENST00000250495 GGPS1O95749 300 aa24.35■■□□□ 1.49
NEDD8-201ENST00000250495 HOXD8P13378 290 aaPredicted RBP24.35■■□□□ 1.49
NEDD8-201ENST00000250495 SMARCA1P28370 1054 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms