RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 SNAP25P60880 206 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 ZXDAP98168 799 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
RFPL3-201ENST00000249007 FBXO11Q86XK2 927 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 TMEM192Q8IY95 271 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 TMEM57Q8N5G2 664 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 SCFD2Q8WU76 684 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 COPS5Q92905 334 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 YME1L1Q96TA2 773 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 PAG1Q9NWQ8 432 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 CCPG1Q9ULG6 757 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 PLXNA3P51805 1871 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 RBAK-RBAKDNI3L0D1 243 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 LGR5O75473 907 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 CHGBP05060 677 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 SLC1A4P43007 532 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.13
RFPL3-201ENST00000249007 SBK1Q52WX2 424 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 ASCL5Q7RTU5 278 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 ZNF444Q8N0Y2 327 aaPredicted RBP14.21□□□□□ -0.13
RFPL3-201ENST00000249007 CHMP4CQ96CF2 233 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 FSD1Q9BTV5 496 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 ACACBO00763 2458 aa14.21□□□□□ -0.13
RFPL3-201ENST00000249007 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 PROB1E7EW31 1015 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 H0Y858 1186 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 TBX10O75333 385 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 PRDM1O75626 825 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 TXNP10599 105 aaKnown RBP14.2□□□□□ -0.14
RFPL3-201ENST00000249007 PDE4BQ07343 736 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 PDE4DQ08499 809 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 HYAL1Q12794 435 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 MBTPS1Q14703 1052 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 UBE3CQ15386 1083 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 GMCL1Q96IK5 515 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 ZNF287Q9HBT7 754 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 TLR9Q9NR96 1032 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 CD207Q9UJ71 328 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 NLRC5Q86WI3 1866 aa14.2□□□□□ -0.14
RFPL3-201ENST00000249007 MCCP23508 829 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 AVPR2P30518 371 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 ID4P47928 161 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 SIGLEC14Q08ET2 396 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
RFPL3-201ENST00000249007 ZNF618Q5T7W0 954 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 TRAF7Q6Q0C0 670 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 PUS7LQ9H0K6 701 aaKnown RBP14.19□□□□□ -0.14
RFPL3-201ENST00000249007 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 EMSYQ7Z589 1322 aa14.19□□□□□ -0.14
RFPL3-201ENST00000249007 PTPDC1A2A3K4 754 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 PRR23AA6NEV1 266 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 NFIBO00712 420 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 PLA2G6O60733 806 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 ICAM1P05362 532 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 KCTD1Q719H9 257 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 CLASRPQ8N2M8 674 aaKnown RBP14.18□□□□□ -0.14
RFPL3-201ENST00000249007 C7orf31Q8N865 590 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 DBF4BQ8NFT6 615 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 AFG1LQ8WV93 481 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 MPHOSPH6Q99547 160 aaKnown RBP14.18□□□□□ -0.14
RFPL3-201ENST00000249007 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 ATG2AQ2TAZ0 1938 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 IFIT2P09913 472 aaKnown RBP14.18□□□□□ -0.14
RFPL3-201ENST00000249007 CALML3P27482 149 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 PTK7Q13308 1070 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 RHPN1Q8TCX5 695 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 KAT2BQ92831 832 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 BOLA2Q9H3K6 86 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 HDAC6Q9UBN7 1215 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 MYH7P12883 1935 aa14.18□□□□□ -0.14
RFPL3-201ENST00000249007 COL4A6Q14031 1691 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 PLIN4Q96Q06 1357 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 CEP250Q9BV73 2442 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 KMT2BQ9UMN6 2715 aaPredicted RBP14.17□□□□□ -0.14
RFPL3-201ENST00000249007 LOC730098B7Z3J9 87 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 KDM4AO75164 1064 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 UPP2O95045 317 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 ARIH2O95376 493 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 MMP3P08254 477 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 TSPY3P0CV98 308 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 TSPY8P0CW00 308 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 CTNNB1P35222 781 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 TRIM71Q2Q1W2 868 aaKnown RBP14.17□□□□□ -0.14
RFPL3-201ENST00000249007 HSP90AB4PQ58FF6 505 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 GIMAP6Q6P9H5 292 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 SLC30A10Q6XR72 485 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 WNT8BQ93098 351 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 TOP1MTQ969P6 601 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 ASIC4Q96FT7 647 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 STRBPQ96SI9 672 aaKnown RBP14.17□□□□□ -0.14
RFPL3-201ENST00000249007 C11orf84Q9BUA3 381 aaPredicted RBP14.17□□□□□ -0.14
RFPL3-201ENST00000249007 LMAN2LQ9H0V9 348 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 IGFLR1Q9H665 355 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 RALGAPA2Q2PPJ7 1873 aa14.17□□□□□ -0.14
RFPL3-201ENST00000249007 GSG1L2A8MUP6 293 aa14.16□□□□□ -0.14
RFPL3-201ENST00000249007 GRM6O15303 877 aa14.16□□□□□ -0.14
RFPL3-201ENST00000249007 LINC01565O15544 149 aa14.16□□□□□ -0.14
RFPL3-201ENST00000249007 EYA4O95677 639 aa14.16□□□□□ -0.14
RFPL3-201ENST00000249007 CASTP20810 708 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms