RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PANK4Q9NVE7 773 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 E9PMD0 336 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 PDHBP11177 359 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 ATP2B4P23634 1241 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 USP14P54578 494 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 MAN2A1Q16706 1144 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 C16orf86Q6ZW13 317 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 MSANTD4Q8NCY6 345 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 TRIM58Q8NG06 486 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 SPAG5Q96R06 1193 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 MAGEF1Q9HAY2 307 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 COL4A1P02462 1669 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 EPHB6O15197 1021 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 TM4SF1P30408 202 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 GRB10Q13322 594 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 GPBP1Q86WP2 473 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 CUL5Q93034 780 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 C7orf25Q9BPX7 421 aa13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.97□□□□□ -0.17
RAB3IP-201ENST00000247833 USP17L10C9JJH3 530 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 UBAP1LF5GYI3 381 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 MEIS1O00470 390 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 PPP1R2P41236 205 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 UNC13DQ70J99 1090 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 CCDC170Q8IYT3 715 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 EXOC4Q96A65 974 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 TSGA10Q9BZW7 698 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 CAPN6Q9Y6Q1 641 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 NPHP3-ACAD11A0A0J9YXS1 232 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 PSMD14O00487 310 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 TUBBP07437 444 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 SERPINB13Q9UIV8 391 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 DOT1LQ8TEK3 1739 aa13.96□□□□□ -0.17
RAB3IP-201ENST00000247833 EIF3CLB5ME19 914 aaKnown RBP13.96□□□□□ -0.18
RAB3IP-201ENST00000247833 SLC1A4P43007 532 aa13.96□□□□□ -0.18
RAB3IP-201ENST00000247833 PPP4CP60510 307 aa13.96□□□□□ -0.18
RAB3IP-201ENST00000247833 CYP4A11Q02928 519 aa13.96□□□□□ -0.18
RAB3IP-201ENST00000247833 TTC19Q6DKK2 380 aaPredicted RBP13.96□□□□□ -0.18
RAB3IP-201ENST00000247833 KCNK18Q7Z418 384 aa13.96□□□□□ -0.18
RAB3IP-201ENST00000247833 EIF3CQ99613 913 aaKnown RBP13.96□□□□□ -0.18
RAB3IP-201ENST00000247833 FTCDO95954 541 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 APBA1Q02410 837 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 EZH2Q15910 746 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 MTMR4Q9NYA4 1195 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 DAGLAQ9Y4D2 1042 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 GOLGA6BA6NDN3 693 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 STAT3P40763 770 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 C8orf74Q6P047 294 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 CCDC65Q8IXS2 484 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 ADGRF4Q8IZF3 695 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 MMTAG2Q9BU76 263 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 LRRC27Q9C0I9 530 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 TMCO5BA8MYB1 307 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 POTECB2RU33 542 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 HLTFQ14527 1009 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 PRR16Q569H4 304 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 TBC1D22AQ8WUA7 517 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 RAD54LQ92698 747 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 TAF4BQ92750 862 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 ZNF622Q969S3 477 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 NOX5Q96PH1 765 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 SEPT11Q9NVA2 429 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 MKRN1Q9UHC7 482 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 RAB21Q9UL25 225 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 PCDHA1Q9Y5I3 950 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 ANKRD36CQ5JPF3 1778 aa13.95□□□□□ -0.18
RAB3IP-201ENST00000247833 GPR75-ASB3A0A0A6YYF3 556 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 PDE2AO00408 941 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 TOM1O60784 492 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 TTLL1O95922 423 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 ACTN2P35609 894 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 AMPD2Q01433 879 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 ASPRV1Q53RT3 343 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 SFMBT2Q5VUG0 894 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 HNRNPLLQ8WVV9 542 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 ARHGAP20Q9P2F6 1191 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 PACSIN2Q9UNF0 486 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 TIAM2Q8IVF5 1701 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 ECM29Q5VYK3 1845 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 MAP2K7O14733 419 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 SELENOOQ9BVL4 669 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 BLOC1S4Q9NUP1 217 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 POLLQ9UGP5 575 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 JRKLQ9Y4A0 524 aa13.94□□□□□ -0.18
RAB3IP-201ENST00000247833 BCL9LQ86UU0 1499 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms