RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 KRT26Q7Z3Y9 468 aa10.69□□□□□ -0.7
IRF1-201ENST00000245414 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
IRF1-201ENST00000245414 CLMNQ96JQ2 1002 aa10.69□□□□□ -0.7
IRF1-201ENST00000245414 RAB3IPQ96QF0 476 aaPredicted RBP10.69□□□□□ -0.7
IRF1-201ENST00000245414 CNOT10Q9H9A5 744 aaKnown RBP10.69□□□□□ -0.7
IRF1-201ENST00000245414 ETNK1Q9HBU6 452 aa10.69□□□□□ -0.7
IRF1-201ENST00000245414 PNMA2Q9UL42 364 aa10.69□□□□□ -0.7
IRF1-201ENST00000245414 KCNJ18B7U540 433 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 AKR1B10O60218 316 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 SHBGP04278 402 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 ALADP13716 330 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 ETS2P15036 469 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 PEX5P50542 639 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 RASSF7Q02833 373 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 ZNF844Q08AG5 666 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 KCNJ12Q14500 433 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 MCMDC2Q4G0Z9 681 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 APTXQ7Z2E3 356 aaKnown RBP10.68□□□□□ -0.7
IRF1-201ENST00000245414 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 LBHD1Q9BQE6 289 aaPredicted RBP10.68□□□□□ -0.7
IRF1-201ENST00000245414 CTTNBP2NLQ9P2B4 639 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 GFPT2O94808 682 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 GSTA2P09210 222 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
IRF1-201ENST00000245414 IGHMBP2P38935 993 aaKnown RBP10.68□□□□□ -0.7
IRF1-201ENST00000245414 HAND2P61296 217 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 MAP7Q14244 749 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 PI16Q6UXB8 463 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 PLCB1Q9NQ66 1216 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 DDX21Q9NR30 783 aaKnown RBP eCLIP10.68□□□□□ -0.7
IRF1-201ENST00000245414 NKX1-2Q9UD57 310 aaPredicted RBP10.68□□□□□ -0.7
IRF1-201ENST00000245414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.68□□□□□ -0.7
IRF1-201ENST00000245414 DLG5Q8TDM6 1919 aa10.68□□□□□ -0.7
IRF1-201ENST00000245414 NUTM2BA6NNL0 878 aaPredicted RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 NUTM2EB1AL46 878 aaPredicted RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 BUB1O43683 1085 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 SKIP12755 728 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 ZNF131P52739 623 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 KRT40Q6A162 431 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 NUDT16Q96DE0 195 aaKnown RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 FAM129AQ9BZQ8 928 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 MAP3K19Q56UN5 1328 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 MED23Q9ULK4 1368 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 E7EWF7 191 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 SUN1O94901 812 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 RARAP10276 462 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 ALOX15P16050 662 aaPredicted RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 ZFXP17010 805 aaPredicted RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 CALB2P22676 271 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 PSMC4P43686 418 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 LRIG3Q6UXM1 1119 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 NANOGNBQ7Z5D8 188 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 ABTB2Q8N961 1025 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 MGARPQ8TDB4 240 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 CHPF2Q9P2E5 772 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 FBXL5Q9UKA1 691 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 SALL1Q9NSC2 1324 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 PDLIM1O00151 329 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 RXRAP19793 462 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 TNNC1P63316 161 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 AIMP1Q12904 312 aaKnown RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 CWF19L2Q2TBE0 894 aaKnown RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 SLC44A4Q53GD3 710 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 USPL1Q5W0Q7 1092 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 PRMT1Q99873 361 aaKnown RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 KRT23Q9C075 422 aa10.67□□□□□ -0.7
IRF1-201ENST00000245414 MAGEC2Q9UBF1 373 aaPredicted RBP10.67□□□□□ -0.7
IRF1-201ENST00000245414 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 CCNFP41002 786 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 GRIN1Q05586 938 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 RNASELQ05823 741 aaKnown RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 SAFBQ15424 915 aaKnown RBP eCLIP10.66□□□□□ -0.7
IRF1-201ENST00000245414 KCTD19Q17RG1 926 aaPredicted RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 IRGCQ6NXR0 463 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 DDX42Q86XP3 938 aaKnown RBP eCLIP10.66□□□□□ -0.7
IRF1-201ENST00000245414 ARHGAP18Q8N392 663 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 MREGQ8N565 214 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 HAUS1Q96CS2 278 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 RNPEPL1Q9HAU8 725 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 GDF3Q9NR23 364 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 LRRC42Q9Y546 428 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 AFF2P51816 1311 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 NVLO15381 856 aaKnown RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 UBTFL6P0CB48 400 aaPredicted RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 ZCCHC18P0CG32 403 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 NAT1P18440 290 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 FECHP22830 423 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 TNFRSF8P28908 595 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 ITIH3Q06033 890 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 ERMARDQ5T6L9 678 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 CDKAL1Q5VV42 579 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 RALYLQ86SE5 291 aaKnown RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 DZIP3Q86Y13 1208 aaKnown RBP10.66□□□□□ -0.7
IRF1-201ENST00000245414 MAP7D3Q8IWC1 876 aa10.66□□□□□ -0.7
IRF1-201ENST00000245414 LINS1Q8NG48 757 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms