RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 CCDC170Q8IYT3 715 aa10.18□□□□□ -0.78
COL21A1-201ENST00000244728 CACNA2D3Q8IZS8 1091 aa10.18□□□□□ -0.78
COL21A1-201ENST00000244728 ENAHQ8N8S7 591 aaPredicted RBP10.18□□□□□ -0.78
COL21A1-201ENST00000244728 MARCH10Q8NA82 808 aaPredicted RBP10.18□□□□□ -0.78
COL21A1-201ENST00000244728 RASAL2Q9UJF2 1139 aa10.18□□□□□ -0.78
COL21A1-201ENST00000244728 HPSEQ9Y251 543 aa10.18□□□□□ -0.78
COL21A1-201ENST00000244728 CPDO75976 1380 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 DAAM2Q86T65 1068 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 MYOCDQ8IZQ8 938 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 RETREG2Q8NC44 543 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 P2RX5Q93086 422 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 CD209Q9NNX6 404 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 DCP1AQ9NPI6 582 aaPredicted RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 LGALS16A8MUM7 142 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 TFRCP02786 760 aaKnown RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 ABCB4P21439 1286 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 SGMS1Q86VZ5 419 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 CCDC127Q96BQ5 260 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 PAIP2Q9BPZ3 127 aaKnown RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 GLT8D2Q9H1C3 349 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 KCND1Q9NSA2 647 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 COL15A1P39059 1388 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 ZNF185O15231 689 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 SMTNP53814 917 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 NFIXQ14938 502 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 GSTA5Q7RTV2 222 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 FOXP4Q8IVH2 680 aaPredicted RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 SUPT20HQ8NEM7 779 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 NAP1L4Q99733 375 aaKnown RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 LSM14BQ9BX40 385 aaKnown RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 STIM2Q9P246 746 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 NFU1Q9UMS0 254 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 CLTCQ00610 1675 aaKnown RBP10.17□□□□□ -0.78
COL21A1-201ENST00000244728 AFF2P51816 1311 aa10.17□□□□□ -0.78
COL21A1-201ENST00000244728 BUB1BO60566 1050 aaPredicted RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 ZBED4O75132 1171 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 HOXA13P31271 388 aaPredicted RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 NKX1-1Q15270 411 aaPredicted RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 FAM26FQ5R3K3 315 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 PEX26Q7Z412 305 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 IQCDQ96DY2 449 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 DHTKD1Q96HY7 919 aaPredicted RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 MPHOSPH6Q99547 160 aaKnown RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 AGXT2Q9BYV1 514 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 PCDHA4Q9UN74 947 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 UTP11Q9Y3A2 253 aaKnown RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 PRPF3O43395 683 aaKnown RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 SPOPO43791 374 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 TTLL1O95922 423 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 FTCDO95954 541 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 NR1D1P20393 614 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 TRAPPC10P48553 1259 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 KIF11P52732 1056 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 POLR2FP61218 127 aaKnown RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 APBA1Q02410 837 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 E2F5Q15329 346 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 EMBQ6PCB8 327 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 TDRD3Q9H7E2 651 aaKnown RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 ANKZF1Q9H8Y5 726 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 MLXIPQ9HAP2 919 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 KCNK9Q9NPC2 374 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 SWAP70Q9UH65 585 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 TFR2Q9UP52 801 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 PCDHA13Q9Y5I0 950 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 NOP56O00567 594 aaKnown RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 LLGL1Q15334 1064 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 ALS2CLQ60I27 953 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 ARHGAP27Q6ZUM4 889 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 IGDCC4Q8TDY8 1250 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 PLVAPQ9BX97 442 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 DPH5Q9H2P9 285 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 PANK4Q9NVE7 773 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 PPP1R7Q15435 360 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 VWA3BQ502W6 1294 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 GKAP1Q5VSY0 366 aaPredicted RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 AMNQ9BXJ7 453 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 NT5C3AQ9H0P0 336 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 THAP9Q9H5L6 903 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 MTRF1LQ9UGC7 380 aaKnown RBP10.16□□□□□ -0.78
COL21A1-201ENST00000244728 HPCAL4Q9UM19 191 aa10.16□□□□□ -0.78
COL21A1-201ENST00000244728 ESYT3A0FGR9 886 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 LRRIQ3A6PVS8 624 aaPredicted RBP10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ACTN4O43707 911 aaKnown RBP10.15□□□□□ -0.78
COL21A1-201ENST00000244728 CCNE1P24864 410 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ITPK1Q13572 414 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ZRSR2Q15696 482 aaKnown RBP10.15□□□□□ -0.78
COL21A1-201ENST00000244728 FBXW10Q5XX13 1052 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 LRRC31Q6UY01 552 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 MIER3Q7Z3K6 550 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 KRT26Q7Z3Y9 468 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 NLRX1Q86UT6 975 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 CLEC10AQ8IUN9 316 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 SMCR8Q8TEV9 937 aaPredicted RBP10.15□□□□□ -0.78
COL21A1-201ENST00000244728 TMEM47Q9BQJ4 181 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ITSN1Q15811 1721 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ANO9A1A5B4 782 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms