RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 MIIPQ5JXC2 388 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 FOXR2Q6PJQ5 311 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 KCNK18Q7Z418 384 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 HPS3Q969F9 1004 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 MBOAT7Q96N66 472 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 ARFGEF1Q9Y6D6 1849 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 SLC26A4O43511 780 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 ARHGAP25P42331 645 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 RBM5P52756 815 aaKnown RBP eCLIP24.42■■□□□ 1.5
RNF39-201ENST00000244360 CDC37Q16543 378 aaPredicted RBP24.42■■□□□ 1.5
RNF39-201ENST00000244360 GMCL1P1Q8NEA9 526 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 NUP58Q9BVL2 599 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 SLC39A2Q9NP94 309 aa24.42■■□□□ 1.5
RNF39-201ENST00000244360 CYP3A7-CYP3A51PA0A087WV96 503 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 CYP3A7P24462 503 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 CYP2C19P33261 490 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 USP11P51784 963 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 ICA1Q05084 483 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 SEPT2Q15019 361 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 MEA1Q16626 185 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 ZNF569Q5MCW4 686 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 ZNF772Q68DY9 489 aaPredicted RBP24.41■■□□□ 1.5
RNF39-201ENST00000244360 CNKSR1Q969H4 720 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 PCDHA1Q9Y5I3 950 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 TNS1Q9HBL0 1735 aaKnown RBP24.41■■□□□ 1.5
RNF39-201ENST00000244360 PSMD2Q13200 908 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 HNRNPLLQ8WVV9 542 aaKnown RBP24.41■■□□□ 1.5
RNF39-201ENST00000244360 GMCL1Q96IK5 515 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 ERGIC2Q96RQ1 377 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 CHP1Q99653 195 aa24.41■■□□□ 1.5
RNF39-201ENST00000244360 ABCB11O95342 1321 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 RASSF10A6NK89 507 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 ENTPD3O75355 529 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 ECM1Q16610 540 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 FIGNQ5HY92 759 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 MOXD1Q6UVY6 613 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 TRIM34Q9BYJ4 488 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 KCNMB3Q9NPA1 279 aa24.4■■□□□ 1.5
RNF39-201ENST00000244360 EPN1Q9Y6I3 576 aaPredicted RBP24.4■■□□□ 1.5
RNF39-201ENST00000244360 KDM3AQ9Y4C1 1321 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 PES1O00541 588 aaKnown RBP24.39■■□□□ 1.5
RNF39-201ENST00000244360 NDUFA10O95299 355 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 MTIF2P46199 727 aaKnown RBP24.39■■□□□ 1.5
RNF39-201ENST00000244360 TBC1D8BQ0IIM8 1120 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 AP3B2Q13367 1082 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 WDR59Q6PJI9 974 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 CRYGNQ8WXF5 182 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 DDX12PQ92771 950 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 ANO3Q9BYT9 981 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 EPC1Q9H2F5 836 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 PCDHA12Q9UN75 941 aa24.39■■□□□ 1.5
RNF39-201ENST00000244360 REXO2Q9Y3B8 237 aaKnown RBP24.39■■□□□ 1.5
RNF39-201ENST00000244360 USP17L15C9J2P7 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L13C9JLJ4 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L11C9JVI0 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L18D6R9N7 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L22D6RA61 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L17D6RBQ6 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L19D6RCP7 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L20D6RJB6 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L24Q0WX57 530 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 AOC3Q16853 763 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 KIF4BQ2VIQ3 1234 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 USP17L6PQ6QN14 398 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 DYMQ7RTS9 669 aa24.39■■□□□ 1.49
RNF39-201ENST00000244360 SASH3O75995 380 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 LRRC63Q05C16 580 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 WHAMMP3Q1A5X7 153 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 ABCB5Q2M3G0 1257 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 MCTP2Q6DN12 878 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 MSANTD4Q8NCY6 345 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 DNAJC19Q96DA6 116 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 NAPGQ99747 312 aaPredicted RBP24.38■■□□□ 1.49
RNF39-201ENST00000244360 SLF1Q9BQI6 1058 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 NOC4LQ9BVI4 516 aaKnown RBP24.38■■□□□ 1.49
RNF39-201ENST00000244360 NT5C3AQ9H0P0 336 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 A0A1W2PQJ5 194 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 MEIS2O14770 477 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 TUBBP07437 444 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 CHRNA5P30532 468 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 IQCDQ96DY2 449 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 FUT8Q9BYC5 575 aa24.38■■□□□ 1.49
RNF39-201ENST00000244360 F5H6K3 240 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 ZBED6P86452 979 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 KLRC3Q07444 240 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 SMC1AQ14683 1233 aaKnown RBP24.37■■□□□ 1.49
RNF39-201ENST00000244360 EEF2KMTQ96G04 330 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 RAB21Q9UL25 225 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 ERLIN1O75477 346 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 CC2D2BQ6DHV5 1058 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 SLC35F6Q8N357 371 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.37■■□□□ 1.49
RNF39-201ENST00000244360 CALCOCO1Q9P1Z2 691 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 SYNPO2Q9UMS6 1093 aa24.37■■□□□ 1.49
RNF39-201ENST00000244360 FGFR1OPO95684 399 aaKnown RBP24.36■■□□□ 1.49
RNF39-201ENST00000244360 NDUFB10O96000 172 aa24.36■■□□□ 1.49
RNF39-201ENST00000244360 OAS2P29728 719 aaKnown RBP24.36■■□□□ 1.49
RNF39-201ENST00000244360 MMP14P50281 582 aa24.36■■□□□ 1.49
RNF39-201ENST00000244360 LONRF2Q1L5Z9 754 aa24.36■■□□□ 1.49
RNF39-201ENST00000244360 TSR1Q2NL82 804 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms