RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 MOCS3O95396 460 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 ICA1Q05084 483 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 CUL4BQ13620 913 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 KCTD19Q17RG1 926 aaPredicted RBP12.7□□□□□ -0.38
CCND1-201ENST00000227507 ARMCX6Q7L4S7 300 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 CSGALNACT2Q8N6G5 542 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 LACRTQ9GZZ8 138 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 VIPAS39Q9H9C1 493 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 NFU1Q9UMS0 254 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 PSMA7O14818 248 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 TRIM14Q14142 442 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 TCP11X2Q5H9J9 407 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 NAIF1Q69YI7 327 aaPredicted RBP12.7□□□□□ -0.38
CCND1-201ENST00000227507 CPLX4Q7Z7G2 160 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 TAX1BP1Q86VP1 789 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 GSDMAQ96QA5 445 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 MLXIPQ9HAP2 919 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 NCK2O43639 380 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 PEX19P40855 299 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 CRKP46108 304 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 NEDD9Q14511 834 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 ABCB5Q2M3G0 1257 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 PNMA8AQ86V59 439 aaPredicted RBP12.7□□□□□ -0.38
CCND1-201ENST00000227507 EPB41L5Q9HCM4 733 aa12.7□□□□□ -0.38
CCND1-201ENST00000227507 HGSO14964 777 aaPredicted RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 ACTN4O43707 911 aaKnown RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 SWT1Q5T5J6 900 aaKnown RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 NFRKBQ6P4R8 1299 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 PYM1Q9BRP8 204 aaKnown RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 LTN1O94822 1766 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 SMIM23A6NLE4 172 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 PPP1R12AO14974 1030 aaPredicted RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 CCDC40Q4G0X9 1142 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 AGPAT5Q9NUQ2 364 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 PI4KBQ9UBF8 816 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 TTC38Q5R3I4 469 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 ERMNQ8TAM6 284 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 CHURC1Q8WUH1 139 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 NOC4LQ9BVI4 516 aaKnown RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 NHEJ1Q9H9Q4 299 aaPredicted RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 PDE2AO00408 941 aaPredicted RBP12.69□□□□□ -0.38
CCND1-201ENST00000227507 IFFO1Q0D2I5 559 aa12.69□□□□□ -0.38
CCND1-201ENST00000227507 MEFVO15553 781 aaPredicted RBP12.68□□□□□ -0.38
CCND1-201ENST00000227507 GSCP56915 257 aaPredicted RBP12.68□□□□□ -0.38
CCND1-201ENST00000227507 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 ZNRF3Q9ULT6 936 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 CHUKO15111 745 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 ZBED4O75132 1171 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 MAGEA1P43355 309 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 ABCC6O95255 1503 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 FMNL1O95466 1100 aaPredicted RBP12.68□□□□□ -0.38
CCND1-201ENST00000227507 FANCBQ8NB91 859 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 TAF4BQ92750 862 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 RMND1Q9NWS8 449 aa12.68□□□□□ -0.38
CCND1-201ENST00000227507 PRPF6O94906 941 aaKnown RBP12.67□□□□□ -0.38
CCND1-201ENST00000227507 KLC4Q9NSK0 619 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 SUGT1Q9Y2Z0 365 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 A0A087X0B3 334 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 TLDC2A0PJX2 215 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 NR1D1P20393 614 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 KLK7P49862 253 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 UBLCP1Q8WVY7 318 aaPredicted RBP12.67□□□□□ -0.38
CCND1-201ENST00000227507 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 RPN1P04843 607 aaKnown RBP12.67□□□□□ -0.38
CCND1-201ENST00000227507 PRCPP42785 496 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 TRMT1LQ7Z2T5 733 aaKnown RBP12.67□□□□□ -0.38
CCND1-201ENST00000227507 IFT20Q8IY31 132 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
CCND1-201ENST00000227507 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
CCND1-201ENST00000227507 LY9Q9HBG7 655 aa12.67□□□□□ -0.38
CCND1-201ENST00000227507 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 TMCO5BA8MYB1 307 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 HEXIM1O94992 359 aaKnown RBP12.66□□□□□ -0.38
CCND1-201ENST00000227507 IFNAR1P17181 557 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 EPHB4P54760 987 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 ASIC1P78348 528 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 AMPD3Q01432 767 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 DPYDQ12882 1025 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
CCND1-201ENST00000227507 MB21D1Q8N884 522 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 SPATA4Q8NEY3 305 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 MS4A14Q96JA4 679 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
CCND1-201ENST00000227507 TDRD3Q9H7E2 651 aaKnown RBP12.66□□□□□ -0.38
CCND1-201ENST00000227507 PAX7P23759 505 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 TBC1D10BQ4KMP7 808 aaPredicted RBP12.66□□□□□ -0.38
CCND1-201ENST00000227507 STRIP1Q5VSL9 837 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 RRAGAQ7L523 313 aa12.66□□□□□ -0.38
CCND1-201ENST00000227507 KRT12Q99456 494 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms