RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 EPB41L5Q9HCM4 733 aa17.11■□□□□ 0.33
VTN-201ENST00000226218 STXBP3O00186 592 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 MDH1P40925 334 aaKnown RBP17.1■□□□□ 0.33
VTN-201ENST00000226218 RASSF7Q02833 373 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 ITGB3BPQ13352 177 aaPredicted RBP17.1■□□□□ 0.33
VTN-201ENST00000226218 GRM4Q14833 912 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 RRAGAQ7L523 313 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 CCDC84Q86UT8 332 aaPredicted RBP17.1■□□□□ 0.33
VTN-201ENST00000226218 NLRP14Q86W24 1093 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 ANKRD13CQ8N6S4 541 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 ANKS1AQ92625 1134 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
VTN-201ENST00000226218 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 TAF1P21675 1872 aa17.1■□□□□ 0.33
VTN-201ENST00000226218 ESYT3A0FGR9 886 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 BUB1O43683 1085 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 HSPA9P38646 679 aaKnown RBP17.09■□□□□ 0.33
VTN-201ENST00000226218 GUCY2DQ02846 1103 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 CCT8L2Q96SF2 557 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 MAD2L2Q9UI95 211 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 HMGB1P1B2RPK0 211 aaPredicted RBP17.09■□□□□ 0.33
VTN-201ENST00000226218 CYTH3O43739 400 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 CYP2D6P10635 497 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 ACTN3Q08043 901 aaPredicted RBP17.09■□□□□ 0.33
VTN-201ENST00000226218 LRRC55Q6ZSA7 311 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 NSUN4Q96CB9 384 aaKnown RBP17.09■□□□□ 0.33
VTN-201ENST00000226218 CXorf56Q9H5V9 222 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 MMRN2Q9H8L6 949 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 TCP11L1Q9NUJ3 509 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
VTN-201ENST00000226218 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
VTN-201ENST00000226218 BHMG1C9JSJ3 638 aaPredicted RBP17.08■□□□□ 0.33
VTN-201ENST00000226218 RASSF9O75901 435 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 NTSR2O95665 410 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 FAM107AO95990 144 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.33
VTN-201ENST00000226218 KCNMA1Q12791 1236 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 RPAINQ86UA6 219 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 SLC39A2Q9NP94 309 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.33
VTN-201ENST00000226218 MYH4Q9Y623 1939 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 WTIPA6NIX2 430 aaPredicted RBP17.08■□□□□ 0.32
VTN-201ENST00000226218 MAP2K2P36507 400 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 AMPD3Q01432 767 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 UBE4AQ14139 1066 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 CDC37Q16543 378 aaPredicted RBP17.08■□□□□ 0.32
VTN-201ENST00000226218 MEI1Q5TIA1 1274 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 FOXR2Q6PJQ5 311 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 TMC4Q7Z404 712 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 TMBIM4Q9HC24 238 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
VTN-201ENST00000226218 PCDHGC5Q9Y5F6 944 aa17.08■□□□□ 0.32
VTN-201ENST00000226218 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 TLR2O60603 784 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 ECHS1P30084 290 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 SMTNP53814 917 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 SEC24CP53992 1094 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 DRP2Q13474 957 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 TRADDQ15628 312 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 NAB2Q15742 525 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 LRIG3Q6UXM1 1119 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 UNC13DQ70J99 1090 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 GUF1Q8N442 669 aaKnown RBP17.07■□□□□ 0.32
VTN-201ENST00000226218 GPATCH11Q8N954 259 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 EIF1ADQ8N9N8 165 aaKnown RBP17.07■□□□□ 0.32
VTN-201ENST00000226218 PNMA1Q8ND90 353 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 SYN2Q92777 582 aaPredicted RBP17.07■□□□□ 0.32
VTN-201ENST00000226218 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 ATP8A2Q9NTI2 1148 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 BLOC1S4Q9NUP1 217 aa17.07■□□□□ 0.32
VTN-201ENST00000226218 PALMO75781 387 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 IFT81Q8WYA0 676 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.06■□□□□ 0.32
VTN-201ENST00000226218 KRT12Q99456 494 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 KIF13BQ9NQT8 1826 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 PVALEFA0A1B0GWK0 134 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 H0YGN5 161 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 NOL4O94818 638 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 ATP2B2Q01814 1243 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 EHHADHQ08426 723 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 PARP10Q53GL7 1025 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 GPIHBP1Q8IV16 184 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
VTN-201ENST00000226218 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
VTN-201ENST00000226218 PLAAQ9Y263 795 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 NFS1Q9Y697 457 aa17.06■□□□□ 0.32
VTN-201ENST00000226218 MYMKA6NI61 221 aa17.05■□□□□ 0.32
VTN-201ENST00000226218 H0YHG0 523 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms