RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 C21orf2O43822 256 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 NDUFA10O95299 355 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 SLC16A2P36021 539 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 TNNI2P48788 182 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 AMPD2Q01433 879 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 BEND6Q5SZJ8 279 aaPredicted RBP24.74■■□□□ 1.55
CCDC9-201ENST00000221922 MSL3Q8N5Y2 521 aaKnown RBP24.74■■□□□ 1.55
CCDC9-201ENST00000221922 CSGALNACT2Q8N6G5 542 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 CHP1Q99653 195 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 NAP1L4Q99733 375 aaKnown RBP24.74■■□□□ 1.55
CCDC9-201ENST00000221922 TDRD3Q9H7E2 651 aaKnown RBP24.74■■□□□ 1.55
CCDC9-201ENST00000221922 MYH7BA7E2Y1 1941 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 SLC37A4O43826 429 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 TDP2O95551 362 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 GRB10Q13322 594 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 PNKPQ96T60 521 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 LRRC27Q9C0I9 530 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 CAPN11Q9UMQ6 739 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 GCFC2P16383 781 aaKnown RBP24.73■■□□□ 1.55
CCDC9-201ENST00000221922 DNM2P50570 870 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 LUC7L2Q9Y383 392 aaKnown RBP24.73■■□□□ 1.55
CCDC9-201ENST00000221922 EDIL3O43854 480 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 ICA1Q05084 483 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 KRT79Q5XKE5 535 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 SLFN13Q68D06 897 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 SIAH1Q8IUQ4 282 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 RTKN2Q8IZC4 609 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 TTLL6Q8N841 843 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 PRMT6Q96LA8 375 aaPredicted RBP24.73■■□□□ 1.55
CCDC9-201ENST00000221922 PSMD1Q99460 953 aa24.73■■□□□ 1.55
CCDC9-201ENST00000221922 DUSP9Q99956 384 aaKnown RBP24.73■■□□□ 1.55
CCDC9-201ENST00000221922 PVALEFA0A1B0GWK0 134 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 CTAGE15A4D2H0 777 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 ERICH4A6NGS2 130 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 CTAGE8P0CG41 777 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 SLC1A4P43007 532 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 SEPT2Q15019 361 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 ABCB5Q2M3G0 1257 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 SHROOM1Q2M3G4 852 aaPredicted RBP24.72■■□□□ 1.55
CCDC9-201ENST00000221922 CTAGE6Q86UF2 777 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 CTAGE4Q8IX94 777 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 GMCL1P1Q8NEA9 526 aa24.72■■□□□ 1.55
CCDC9-201ENST00000221922 LARP4BQ92615 738 aaKnown RBP24.72■■□□□ 1.55
CCDC9-201ENST00000221922 ZCCHC17Q9NP64 241 aaKnown RBP24.72■■□□□ 1.55
CCDC9-201ENST00000221922 STK4Q13043 487 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 ZNF662Q6ZS27 426 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 UNC13DQ70J99 1090 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 PNMA5Q96PV4 448 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 PSTPIP2Q9H939 334 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 BLOC1S4Q9NUP1 217 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 MYO6Q9UM54 1294 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 ERLIN1O75477 346 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 TUBBP07437 444 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 WDR59Q6PJI9 974 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 HAUS4Q9H6D7 363 aa24.71■■□□□ 1.55
CCDC9-201ENST00000221922 DDX25Q9UHL0 483 aaKnown RBP24.71■■□□□ 1.55
CCDC9-201ENST00000221922 PSMD14O00487 310 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 PES1O00541 588 aaKnown RBP24.7■■□□□ 1.54
CCDC9-201ENST00000221922 MEA1Q16626 185 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 UBE2SQ16763 222 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 RSBN1LQ6PCB5 846 aaPredicted RBP24.7■■□□□ 1.54
CCDC9-201ENST00000221922 HDXQ7Z353 690 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 SNX29Q8TEQ0 813 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 TUBGCP2Q9BSJ2 902 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 TSR1Q2NL82 804 aaKnown RBP24.7■■□□□ 1.54
CCDC9-201ENST00000221922 QRICH1Q2TAL8 776 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 RAD54LQ92698 747 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 GMCL1Q96IK5 515 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 NUP58Q9BVL2 599 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 CALCOCO1Q9P1Z2 691 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 L1RE1Q9UN81 338 aa24.7■■□□□ 1.54
CCDC9-201ENST00000221922 TFRCP02786 760 aaKnown RBP24.69■■□□□ 1.54
CCDC9-201ENST00000221922 FCER1AP12319 257 aa24.69■■□□□ 1.54
CCDC9-201ENST00000221922 TMEM119Q4V9L6 283 aa24.69■■□□□ 1.54
CCDC9-201ENST00000221922 ANKRD40Q6AI12 368 aa24.69■■□□□ 1.54
CCDC9-201ENST00000221922 RETREG2Q8NC44 543 aa24.69■■□□□ 1.54
CCDC9-201ENST00000221922 SYNPO2Q9UMS6 1093 aa24.69■■□□□ 1.54
CCDC9-201ENST00000221922 ATF5Q9Y2D1 282 aaPredicted RBP24.69■■□□□ 1.54
CCDC9-201ENST00000221922 MCM6Q14566 821 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 KIAA0895Q8NCT3 520 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 CNOT6LQ96LI5 555 aaKnown RBP24.68■■□□□ 1.54
CCDC9-201ENST00000221922 TTYH3Q9C0H2 523 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 TMOD2Q9NZR1 351 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 SPDYE2BA6NHP3 402 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 POTEMA6NI47 508 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 MYMKA6NI61 221 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 H3BQF6 201 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 GDF11O95390 407 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 SPDYE6P0CI01 402 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 CDC37Q16543 378 aaPredicted RBP24.68■■□□□ 1.54
CCDC9-201ENST00000221922 TRAPPC11Q7Z392 1133 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 CSRNP1Q96S65 589 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 GMLQ99445 158 aa24.68■■□□□ 1.54
CCDC9-201ENST00000221922 PDGFDQ9GZP0 370 aaPredicted RBP24.68■■□□□ 1.54
CCDC9-201ENST00000221922 HERC5Q9UII4 1024 aaKnown RBP24.68■■□□□ 1.54
CCDC9-201ENST00000221922 KIF13BQ9NQT8 1826 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 F5H6K3 240 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 MARCH6O60337 910 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 VIL1P09327 827 aaKnown RBP24.67■■□□□ 1.54
CCDC9-201ENST00000221922 HERVK_113P62684 666 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms