RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CCNT1O60563 726 aaKnown RBP31■■■□□ 2.55
CHMP4B-201ENST00000217402 TDP2O95551 362 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 CYP3A4P08684 503 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 TOB1P50616 345 aaPredicted RBP31■■■□□ 2.55
CHMP4B-201ENST00000217402 USP11P51784 963 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 IRF5Q13568 498 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 OLFML2BQ68BL8 750 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 MAMDC4Q6UXC1 1216 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 TRIB2Q92519 343 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 LRRC37A2A6NM11 1700 aa31■■■□□ 2.55
CHMP4B-201ENST00000217402 LOC102724159A0A0B4J2E5 919 aa30.99■■■□□ 2.55
CHMP4B-201ENST00000217402 PWP2Q15269 919 aaKnown RBP30.99■■■□□ 2.55
CHMP4B-201ENST00000217402 RILPL1Q5EBL4 403 aa30.99■■■□□ 2.55
CHMP4B-201ENST00000217402 XRRA1Q6P2D8 792 aa30.99■■■□□ 2.55
CHMP4B-201ENST00000217402 MORC4Q8TE76 937 aa30.99■■■□□ 2.55
CHMP4B-201ENST00000217402 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.99■■■□□ 2.55
CHMP4B-201ENST00000217402 SYNGAP1Q96PV0 1343 aa30.99■■■□□ 2.55
CHMP4B-201ENST00000217402 FAM86B1E9PN63 330 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 FAM86B2P0C5J1 330 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 ELNP15502 786 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 CYP2C19P33261 490 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 TRAPPC10P48553 1259 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 PRMT2P55345 433 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 TTC38Q5R3I4 469 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 CYP2W1Q8TAV3 490 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 ADCY3O60266 1144 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 FBXO16Q8IX29 292 aaPredicted RBP30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 MSL3Q8N5Y2 521 aaKnown RBP30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 PTCH2Q9Y6C5 1203 aa30.98■■■□□ 2.55
CHMP4B-201ENST00000217402 MCM3APO60318 1980 aa30.97■■■□□ 2.55
CHMP4B-201ENST00000217402 SNAI1O95863 264 aaPredicted RBP30.97■■■□□ 2.55
CHMP4B-201ENST00000217402 CEP55Q53EZ4 464 aa30.97■■■□□ 2.55
CHMP4B-201ENST00000217402 PCDHB6Q9Y5E3 794 aa30.97■■■□□ 2.55
CHMP4B-201ENST00000217402 EIF3JO75822 258 aaKnown RBP30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 ITGB5P18084 799 aa30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 CIITAP33076 1130 aa30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 MCM7P33993 719 aa30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 ZNF174Q15697 407 aa30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 PRR16Q569H4 304 aa30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 MXRA8Q9BRK3 442 aa30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 FTOQ9C0B1 505 aaKnown RBP eCLIP30.96■■■□□ 2.552e-10■■■□□ 16.3
CHMP4B-201ENST00000217402 UBIAD1Q9Y5Z9 338 aa30.96■■■□□ 2.55
CHMP4B-201ENST00000217402 CHAMP1Q96JM3 812 aa30.95■■■□□ 2.55
CHMP4B-201ENST00000217402 DDX25Q9UHL0 483 aaKnown RBP30.95■■■□□ 2.55
CHMP4B-201ENST00000217402 SLC37A4O43826 429 aa30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 STAM2O75886 525 aa30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 RGS20O76081 388 aa30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 SEPT14Q6ZU15 432 aa30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 TRMT44Q8IYL2 757 aaKnown RBP30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 WDR11Q9BZH6 1224 aa30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 CNPY2Q9Y2B0 182 aa30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 PTPN22Q9Y2R2 807 aa30.95■■■□□ 2.54
CHMP4B-201ENST00000217402 IGLV3-22A0A075B6J6 115 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 GCFC2P16383 781 aaKnown RBP30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 PRAMEF19Q5SWL8 479 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 MFSD14CQ5VZR4 134 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 PPP4R3AQ6IN85 833 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 MOXD1Q6UVY6 613 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 CTU1Q7Z7A3 348 aaKnown RBP30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 PLA2G4DQ86XP0 818 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 INPP4AQ96PE3 977 aaPredicted RBP30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 UIMC1Q96RL1 719 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 NAP1L4Q99733 375 aaKnown RBP30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 ZHX1Q9UKY1 873 aaPredicted RBP30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 ATP6V1DQ9Y5K8 247 aa30.94■■■□□ 2.54
CHMP4B-201ENST00000217402 CYP3A7-CYP3A51PA0A087WV96 503 aa30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 IGHA2P01877 340 aa30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 CYP3A7P24462 503 aa30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 CEBPZQ03701 1054 aaKnown RBP30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 DNM1Q05193 864 aaKnown RBP30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 TRIM32Q13049 653 aa30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 GNPTABQ3T906 1256 aa30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 JADE2Q9NQC1 790 aa30.93■■■□□ 2.54
CHMP4B-201ENST00000217402 MTMR1Q13613 665 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 NLRX1Q86UT6 975 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 POTEDQ86YR6 584 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 LENG9Q96B70 501 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 USP28Q96RU2 1077 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 KATNBL1Q9H079 304 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 VTA1Q9NP79 307 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 MYH15Q9Y2K3 1946 aa30.92■■■□□ 2.54
CHMP4B-201ENST00000217402 MEIS1O00470 390 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 SLAIN1Q8ND83 568 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 PXYLP1Q8TE99 480 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 MBOAT7Q96N66 472 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 ZNF396Q96N95 335 aaPredicted RBP30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 ABHD16BQ9H3Z7 469 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 PDGFCQ9NRA1 345 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 TFIP11Q9UBB9 837 aaKnown RBP30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 CLIC4Q9Y696 253 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 NEMFO60524 1076 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 HMGCRP04035 888 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 SETQ01105 290 aaPredicted RBP30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 ACVR2BQ13705 512 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 Q4G0T1 1027 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 GPRASP2Q96D09 838 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 PKD2L1Q9P0L9 805 aa30.91■■■□□ 2.54
CHMP4B-201ENST00000217402 HTTP42858 3142 aa30.9■■■□□ 2.54
CHMP4B-201ENST00000217402 ARP10275 920 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms