RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 CCDC84Q86UT8 332 aaPredicted RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 CABP7Q86V35 215 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 DZIP3Q86Y13 1208 aaKnown RBP10.69□□□□□ -0.7
TUBB1-201ENST00000217133 KLHL7Q8IXQ5 586 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 CCDC24Q8N4L8 307 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 NDST4Q9H3R1 872 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 CCDC87Q9NVE4 849 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 DOT1LQ8TEK3 1739 aa10.69□□□□□ -0.7
TUBB1-201ENST00000217133 NMT2O60551 498 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 FTCDO95954 541 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 FCER1AP12319 257 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 TNFRSF8P28908 595 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 PPP1R2P41236 205 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 AMPD3Q01432 767 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 GFPT1Q06210 699 aaPredicted RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 ENOX2Q16206 610 aaKnown RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 CCDC13Q8IYE1 715 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 PROM2Q8N271 834 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 TAF4BQ92750 862 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 TMEM60Q9H2L4 133 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 VCPKMTQ9H867 229 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 KBTBD4Q9NVX7 518 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 RNF14Q9UBS8 474 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 PLAAQ9Y263 795 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 USP17L21D6R901 530 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 GCOM1H8Y6P7 765 aaPredicted RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 FAM107AO95990 144 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 MYZAPP0CAP1 466 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 PLCG1P19174 1290 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 IGHMBP2P38935 993 aaKnown RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 SMTNP53814 917 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 TNNC1P63316 161 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 DDR1Q08345 913 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 VWA3BQ502W6 1294 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 MIIPQ5JXC2 388 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 YTHDF3Q7Z739 585 aaKnown RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 WHAMMQ8TF30 809 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 ZKSCAN4Q969J2 545 aaPredicted RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 MTMR8Q96EF0 704 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 SCLT1Q96NL6 688 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 SLC39A2Q9NP94 309 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 NLRC4Q9NPP4 1024 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 DONSONQ9NYP3 566 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 AKAP11Q9UKA4 1901 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 TSPY2A6NKD2 308 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 ADAMTS3O15072 1205 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 FGFR1OPO95684 399 aaKnown RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 SLC1A4P43007 532 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 CNNM4Q6P4Q7 775 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 TMC4Q7Z404 712 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 RPAINQ86UA6 219 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 SRP68Q9UHB9 627 aaKnown RBP10.68□□□□□ -0.7
TUBB1-201ENST00000217133 ANAPC4Q9UJX5 808 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 ODF2LQ9ULJ1 636 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 PCDHA4Q9UN74 947 aa10.68□□□□□ -0.7
TUBB1-201ENST00000217133 EPHB6O15197 1021 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 ADGRA1Q86SQ6 560 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 N4BP2L2Q92802 583 aaPredicted RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 HPS3Q969F9 1004 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 TRIM9Q9C026 710 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 CCSER1Q9C0I3 900 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 SLC40A1Q9NP59 571 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 A1CFQ9NQ94 594 aaKnown RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 GDF3Q9NR23 364 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 FAM205AQ6ZU69 1335 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 EHHADHQ08426 723 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 SNCBQ16143 134 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 KLHDC7AQ5VTJ3 777 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 C4orf32Q8N8J7 132 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 CASKIN2Q8WXE0 1202 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 SALL4Q9UJQ4 1053 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 KIF1CO43896 1103 aaKnown RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 PALMO75781 387 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 HNRNPH3P31942 346 aaKnown RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 EN1Q05925 392 aaPredicted RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 SEMA3FQ13275 785 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 MAN2A1Q16706 1144 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 SLC9C1Q4G0N8 1177 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 HEATR3Q7Z4Q2 680 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 ZSCAN29Q8IWY8 852 aaPredicted RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 RNF10Q8N5U6 811 aaKnown RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 CYFIP2Q96F07 1278 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 CUEDC2Q9H467 287 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 ACTR5Q9H9F9 607 aaPredicted RBP10.67□□□□□ -0.7
TUBB1-201ENST00000217133 VEZTQ9HBM0 779 aa10.67□□□□□ -0.7
TUBB1-201ENST00000217133 EZRP15311 586 aaKnown RBP10.66□□□□□ -0.7
TUBB1-201ENST00000217133 ELF1P32519 619 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 ARID5AQ03989 594 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 TACO1Q9BSH4 297 aaKnown RBP10.66□□□□□ -0.7
TUBB1-201ENST00000217133 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.66□□□□□ -0.7
TUBB1-201ENST00000217133 ITGB4P16144 1822 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 CTNNA1P35221 906 aaKnown RBP10.66□□□□□ -0.7
TUBB1-201ENST00000217133 SLC4A8Q2Y0W8 1093 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 PPP4R3AQ6IN85 833 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 CALML4Q96GE6 196 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms