RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 TCP11L1Q9NUJ3 509 aa17.61■□□□□ 0.41
SNAPC1-201ENST00000216294 ZSCAN5CA6NGD5 496 aaPredicted RBP17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 MYMKA6NI61 221 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 SLC37A4O43826 429 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 TDP2O95551 362 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 KRT83P78385 493 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 ZBED6P86452 979 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 KIF5AQ12840 1032 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 CREG2Q8IUH2 290 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 TEX11Q8IYF3 940 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 PROCA1Q8NCQ7 364 aaPredicted RBP17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 GBP3Q9H0R5 595 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 UTRNP46939 3433 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 LTBP1Q14766 1721 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 LRRC53A6NM62 1247 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 NPR1P16066 1061 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 RASA1P20936 1047 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 RXRBP28702 533 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 ARID5AQ03989 594 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 TUBB2AQ13885 445 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 SND1Q7KZF4 910 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 CRACR2AQ9BSW2 395 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 TUBB2BQ9BVA1 445 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 FGFBP2Q9BYJ0 223 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 IFIH1Q9BYX4 1025 aaKnown RBP17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 CCSER1Q9C0I3 900 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 LRRC37AA6NMS7 1700 aa17.6■□□□□ 0.41
SNAPC1-201ENST00000216294 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 ESYT3A0FGR9 886 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 USP17L5A8MUK1 530 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 CCNI2Q6ZMN8 369 aaPredicted RBP17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 AFAP1L1Q8TED9 768 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 MXD3Q9BW11 206 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 PACSIN2Q9UNF0 486 aaPredicted RBP17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 PCDHA13Q9Y5I0 950 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 RASSF7Q02833 373 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 DGKHQ86XP1 1220 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 RASSF4Q9H2L5 321 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 DEF6Q9H4E7 631 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 ROBO3Q96MS0 1386 aa17.59■□□□□ 0.41
SNAPC1-201ENST00000216294 PALM3A6NDB9 673 aaPredicted RBP17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 EIF3CLB5ME19 914 aaKnown RBP17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 KIF11P52732 1056 aa17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 RHBDL3P58872 404 aa17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 ECM1Q16610 540 aa17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 AMOTL1Q8IY63 956 aa17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 EIF3CQ99613 913 aaKnown RBP17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 BLOC1S4Q9NUP1 217 aa17.58■□□□□ 0.41
SNAPC1-201ENST00000216294 VAV2P52735 878 aa17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 NAP1L1P55209 391 aaKnown RBP17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 GRB10Q13322 594 aa17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 TRADDQ15628 312 aa17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 PLCD3Q8N3E9 789 aa17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 DHTKD1Q96HY7 919 aaPredicted RBP17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 PYM1Q9BRP8 204 aaKnown RBP17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 CWC15Q9P013 229 aaKnown RBP17.58■□□□□ 0.4
SNAPC1-201ENST00000216294 AKR1B10O60218 316 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 DPP8Q6V1X1 898 aaPredicted RBP17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 LRRC47Q8N1G4 583 aaKnown RBP17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 TSEN2Q8NCE0 465 aaKnown RBP17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 TBC1D22AQ8WUA7 517 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.43e-6■□□□□ 8.1
SNAPC1-201ENST00000216294 CEP95Q96GE4 821 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 NDST4Q9H3R1 872 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 NAV1Q8NEY1 1877 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 EDIL3O43854 480 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 NONOQ15233 471 aaKnown RBP eCLIP17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 SPA17Q15506 151 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 UBE2SQ16763 222 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 CERS5Q8N5B7 392 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 MTMR8Q96EF0 704 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 PNMA5Q96PV4 448 aa17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 ZC3H12CQ9C0D7 883 aaKnown RBP17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 COL11A2P13942 1736 aaPredicted RBP17.57■□□□□ 0.4
SNAPC1-201ENST00000216294 SSBP05455 408 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 HMGB2P26583 209 aaKnown RBP17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 PDE6BP35913 854 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 SLC1A4P43007 532 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 KCTD16Q68DU8 428 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 EYA3Q99504 573 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 SH3GLB2Q9NR46 395 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 SNX12Q9UMY4 172 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 DAGLAQ9Y4D2 1042 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 GAKO14976 1311 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 NPHP3-ACAD11A0A0J9YXS1 232 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 NEK8Q86SG6 692 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 GOLPH3Q9H4A6 298 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 SIK3Q9Y2K2 1263 aa17.56■□□□□ 0.4
SNAPC1-201ENST00000216294 CDK8P49336 464 aa17.55■□□□□ 0.4
SNAPC1-201ENST00000216294 VWA3BQ502W6 1294 aa17.55■□□□□ 0.4
SNAPC1-201ENST00000216294 SH2D3CQ8N5H7 860 aa17.55■□□□□ 0.4
SNAPC1-201ENST00000216294 SPATA4Q8NEY3 305 aa17.55■□□□□ 0.4
SNAPC1-201ENST00000216294 ARL8AQ96BM9 186 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms