RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
UPK3A-201ENST00000216211 PTPRSQ13332 1948 aa17.44■□□□□ 0.38
UPK3A-201ENST00000216211 DOCK5Q9H7D0 1870 aa17.44■□□□□ 0.38
UPK3A-201ENST00000216211 E7EWF7 191 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 IFIT3O14879 490 aaKnown RBP17.43■□□□□ 0.38
UPK3A-201ENST00000216211 NR3C2P08235 984 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 HSD17B4P51659 736 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 RABGGTBP53611 331 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 PTPN11Q06124 597 aaPredicted RBP17.43■□□□□ 0.38
UPK3A-201ENST00000216211 GRM4Q14833 912 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 HOMER1Q86YM7 354 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 USP38Q8NB14 1042 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 GAS2L1Q99501 681 aaPredicted RBP17.43■□□□□ 0.38
UPK3A-201ENST00000216211 CHD7Q9P2D1 2997 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 PCDHA1Q9Y5I3 950 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 SLC4A7Q9Y6M7 1214 aa17.43■□□□□ 0.38
UPK3A-201ENST00000216211 ERICH2A1L162 156 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 SGSM2O43147 1006 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 EIF3JO75822 258 aaKnown RBP17.42■□□□□ 0.38
UPK3A-201ENST00000216211 GHRHRQ02643 423 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 WTAPQ15007 396 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 STOX1Q6ZVD7 989 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 RALYLQ86SE5 291 aaKnown RBP17.42■□□□□ 0.38
UPK3A-201ENST00000216211 NCOA7Q8NI08 942 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 PIGSQ96S52 555 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 SLC28A3Q9HAS3 691 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 DDX41Q9UJV9 622 aaKnown RBP17.42■□□□□ 0.38
UPK3A-201ENST00000216211 NOD1Q9Y239 953 aa17.42■□□□□ 0.38
UPK3A-201ENST00000216211 PFKMP08237 780 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 MYCLP12524 364 aaPredicted RBP17.41■□□□□ 0.38
UPK3A-201ENST00000216211 MYOGP15173 224 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
UPK3A-201ENST00000216211 HOXA13P31271 388 aaPredicted RBP17.41■□□□□ 0.38
UPK3A-201ENST00000216211 GDF6Q6KF10 455 aaPredicted RBP17.41■□□□□ 0.38
UPK3A-201ENST00000216211 RETREG2Q8NC44 543 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 PPM1EQ8WY54 764 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 KAT2BQ92831 832 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 PDCD2LQ9BRP1 358 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 MRVI1Q9Y6F6 885 aa17.41■□□□□ 0.38
UPK3A-201ENST00000216211 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 CYTH3O43739 400 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 IQCF3P0C7M6 154 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 ATP2A2P16615 1042 aaKnown RBP17.4■□□□□ 0.38
UPK3A-201ENST00000216211 RFC2P35250 354 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 BFSP2Q13515 415 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 PGM5Q15124 567 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 PTGISQ16647 500 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 DGKDQ16760 1214 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 ALG1Q9BT22 464 aa17.4■□□□□ 0.38
UPK3A-201ENST00000216211 MAP3K20Q9NYL2 800 aaKnown RBP17.4■□□□□ 0.38
UPK3A-201ENST00000216211 REV3LO60673 3130 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 SORBS3O60504 671 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 RGS20O76081 388 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 ACTN1P12814 892 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 ANTXR2P58335 489 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 TROAPQ12815 778 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 ADGRE1Q14246 886 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
UPK3A-201ENST00000216211 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 DHX37Q8IY37 1157 aaKnown RBP17.39■□□□□ 0.37
UPK3A-201ENST00000216211 SAMD3Q8N6K7 520 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 IL31RAQ8NI17 732 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 EMID1Q96A84 441 aaPredicted RBP17.39■□□□□ 0.37
UPK3A-201ENST00000216211 ZFP91Q96JP5 570 aaPredicted RBP17.39■□□□□ 0.37
UPK3A-201ENST00000216211 CTAGE1Q96RT6 745 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
UPK3A-201ENST00000216211 PRDM6Q9NQX0 595 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 PCDHA11Q9Y5I1 949 aa17.39■□□□□ 0.37
UPK3A-201ENST00000216211 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
UPK3A-201ENST00000216211 ZNF286BP0CG31 522 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 IGFBP4P22692 258 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 PSEN2P49810 448 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 LAMC2Q13753 1193 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 PPP2R2DQ66LE6 453 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 SESTD1Q86VW0 696 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 FCHSD1Q86WN1 690 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
UPK3A-201ENST00000216211 PPTC7Q8NI37 304 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 PIBF1Q8WXW3 757 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 HDAC6Q9UBN7 1215 aa17.38■□□□□ 0.37
UPK3A-201ENST00000216211 TRANK1O15050 2925 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 GCOM1H8Y6P7 765 aaPredicted RBP17.37■□□□□ 0.37
UPK3A-201ENST00000216211 POLR2MP0CAP2 368 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 TRAF1Q13077 416 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 MFSD10Q14728 455 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 CCDC155Q8N6L0 562 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 C7orf31Q8N865 590 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 CAGE1Q8TC20 777 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 DHX38Q92620 1227 aaKnown RBP17.37■□□□□ 0.37
UPK3A-201ENST00000216211 GPKOWQ92917 476 aaPredicted RBP eCLIP17.37■□□□□ 0.37
UPK3A-201ENST00000216211 KATNAL1Q9BW62 490 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 GTF2IRD1Q9UHL9 959 aa17.37■□□□□ 0.37
UPK3A-201ENST00000216211 GGPS1O95749 300 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms