RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm3278L7N2D2 218 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm8271L7N2E2 218 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Cyp11b2P15539 500 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Pik3r1P26450 724 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mapk4Q6P5G0 583 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Apbb1ipQ8R5A3 670 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Kiaa0232Q80U59 1396 aaKnown RBP15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Atxn2lQ7TQH0 1049 aaKnown RBP15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Znf830Q8R1N0 363 aaKnown RBP15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ces1Q8VCC2 565 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Filip1Q9CS72 1211 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Thap12Q9CUX1 758 aa15.11■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ercc5P35689 1170 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 NfixP70257 488 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Sparcl1P70663 650 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Usp50Q6P8X6 390 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 GypcQ78HU7 95 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ints8Q80V86 995 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Itgb1bp2Q9R000 350 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm4297D3YWB7 211 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Pik3caP42337 1068 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Sem1P60897 70 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Slc10a4Q3UEZ8 437 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Fhdc1Q3ULZ2 1149 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Lca5Q80ST9 704 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rcor2Q8C796 523 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gbp7Q91Z40 638 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Samd15F6XZJ7 620 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Nr2f2P43135 414 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Myo1fP70248 1099 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ppp4cP97470 307 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Dact3Q0PHV7 610 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Fam196bQ6GQV1 535 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Edrf1Q6GQV7 1239 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Vat1lQ80TB8 417 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ube3cQ80U95 1083 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 HhatQ8BMT9 499 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Zcchc18Q8VD24 393 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ddx39aQ8VDW0 427 aaKnown RBP15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rnaseh2aQ9CWY8 301 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Nfe2l3Q9WTM4 660 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Kif20bQ80WE4 1774 aaKnown RBP15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Fbxl16A2RT62 479 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Tmod1P49813 359 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Lig3P97386 1015 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm3414Q3TNU4 584 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rnf40Q3U319 1001 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ubxn2aQ99KJ0 258 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 MesdQ9ERE7 224 aa15.1■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 CtshP49935 333 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Morc2bQ8C5W4 1022 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rab44Q8CB87 725 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mxra7Q9CZH7 178 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Myo1cQ9WTI7 1063 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 C87977A2A958 498 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Gm3893E9Q1I1 302 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 AlcamQ61490 583 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Rab34Q64008 259 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Dync1li2Q6PDL0 492 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Bzw2Q91VK1 419 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 GrapQ9CX99 217 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Lmnb1P14733 588 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mphosph8Q3TYA6 858 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Cyp4x1Q6A152 507 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Brd2Q7JJ13 798 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 D130040H23RikQ8BII3 405 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 C8aQ8K182 587 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Usp11Q99K46 921 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Zfyve9A2A8R0 1397 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Apol11aE9PZG0 334 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Psen2Q61144 448 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Pcdhb14Q6PB90 796 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Dppa3Q8QZY3 150 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Mtmr4Q91XS1 1190 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Klc4Q9DBS5 619 aa15.09■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Otud7bB2RUR8 840 aa15.08■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Ahcyl2Q68FL4 613 aaKnown RBP15.08■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Anks6Q6GQX6 883 aa15.08■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Dhx37Q6NZL1 1150 aa15.08■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Serpinb3dQ6UKZ0 387 aa15.08■□□□□ 0.01
Pcdha1-202ENSMUST00000193839 Itsn1Q9Z0R4 1714 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Cyp2c68K7N6C2 491 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Tfdp1Q08639 410 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Nt5c2Q3V1L4 560 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Scfd2Q8BTY8 684 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Myef2Q8C854 591 aaKnown RBP15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 EcsitQ9QZH6 435 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Slc39a2G3X943 309 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Ctnna1P26231 906 aaKnown RBP15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Eps15P42567 897 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Anks1aP59672 1150 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Lins1Q3U1D0 764 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Cdc37Q61081 379 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Efcab14Q8BGQ6 484 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Ccz1Q8C1Y8 480 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 CactinQ9CS00 772 aaKnown RBP15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Prkab1Q9R078 270 aa15.08■□□□□ 0
Pcdha1-202ENSMUST00000193839 Gm6583E9Q8Z1 469 aa15.07■□□□□ 0
Pcdha1-202ENSMUST00000193839 Ccng2O08918 344 aa15.07■□□□□ 0
Pcdha1-202ENSMUST00000193839 L1camP11627 1260 aa15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms