RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Ube3aO08759 870 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Sox5P35710 763 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Polr2fP61219 127 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Neurog2P70447 263 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Esyt2Q3TZZ7 845 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Ckap2Q3V1H1 664 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Ddx49Q4FZF3 480 aaKnown RBP11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Znf827Q505G8 1078 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Fez2Q6TYB5 348 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Nap1l4Q78ZA7 375 aaKnown RBP11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Slitrk3Q810B9 980 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Ushbp1Q8R370 680 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Rbm42Q91V81 474 aaKnown RBP11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Syce1Q9D495 329 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Lonp2Q9DBN5 852 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Add1Q9QYC0 735 aaKnown RBP11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 BC051142Q3V0M8 400 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Arhgef19Q8BWA8 802 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Vnn1Q9Z0K8 512 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Cdr2lA2A6T1 465 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Tldc2A2ACG1 198 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Wnt7aP24383 349 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Ighmbp2P40694 993 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Gucy2cQ3UWA6 1072 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Hook2Q7TMK6 716 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Zbed4Q80WQ9 1168 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Ireb2Q811J3 963 aaKnown RBP11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Q91WD4 421 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Arfgap2Q99K28 520 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Tex21Q9R0U9 575 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Grin2dQ03391 1323 aa11.85□□□□□ -0.51
Msh3-202ENSMUST00000185852 Sema4dO09126 861 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 En2P09066 324 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Sval3Q76I99 144 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Siglec10Q80ZE3 688 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Stac3Q8BZ71 360 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Stoml1Q8CI66 399 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Syne4Q8CII8 388 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Olfr397Q8VEZ6 315 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Grin3bQ91ZU9 1003 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Gm43738A0A0G2JEA5 862 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Gm3415J3QMS8 315 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Nmt1O70310 496 aaKnown RBP11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Nxf2Q4ZGD8 691 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Klhl7Q8BUL5 586 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Tor1aip1Q921T2 595 aaKnown RBP11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Gm3404Q9D506 307 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Hyou1Q9JKR6 999 aaKnown RBP11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Nfx1B1AY10 1114 aaKnown RBP11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Gm4841E9QAA8 417 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Dcdc2bF7BCK0 340 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Cst8P32766 142 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Q3TTJ4 293 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Psmd1Q3TXS7 953 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Skiv2lQ6NZR5 1244 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Hook3Q8BUK6 718 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Trpc3Q9QZC1 836 aa11.84□□□□□ -0.51
Msh3-202ENSMUST00000185852 Tex2Q6ZPJ0 1128 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Ppp2r2cQ8BG02 447 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Wdr3Q8BHB4 942 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Pdlim2Q8R1G6 349 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Elp3Q9CZX0 547 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Sucla2Q9Z2I9 463 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 CntrlA2AL36 2334 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Ice1E9Q286 2241 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 AoahO35298 574 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 MlxipQ2VPU4 917 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Atp13a3Q5XF89 1219 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Gga3Q8BMI3 718 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Trub2Q91WG3 331 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Ddx20Q9JJY4 825 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Usp14Q9JMA1 493 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Akt3Q9WUA6 479 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Arfgef2A2A5R2 1792 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Acad12D3Z7X0 555 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Arhgap6O54834 987 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Actn3O88990 900 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 NfibP97863 570 aaKnown RBP11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Dact3Q0PHV7 610 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Sv2cQ69ZS6 727 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Ubxn1Q922Y1 297 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Bco2Q99NF1 532 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 1700018B08RikQ9DA83 213 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Git2Q9JLQ2 708 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Txnrd2Q9JLT4 524 aa11.83□□□□□ -0.52
Msh3-202ENSMUST00000185852 Kif3cO35066 796 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Krt19P19001 403 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Nek1P51954 1203 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Cep126Q0VBV7 1103 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 SpopQ6ZWS8 374 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Elmo3Q8BYZ7 720 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Shisa4Q8CA71 197 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 1700016D06RikQ9DAA5 166 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Fem1bQ9Z2G0 627 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Psmd10Q9Z2X2 231 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Zdbf2Q5SS00 2493 aaKnown RBP11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Cdc27A2A6Q5 825 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 AaasP58742 546 aa11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Top1Q04750 767 aaKnown RBP11.82□□□□□ -0.52
Msh3-202ENSMUST00000185852 Slc9c1Q6UJY2 1175 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms