RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Krt79Q8VED5 531 aa19.21■□□□□ 0.67
Ckap4-202ENSMUST00000167671 Creb3l3Q91XE9 479 aa19.21■□□□□ 0.67
Ckap4-202ENSMUST00000167671 Ndufab1Q9CR21 156 aa19.21■□□□□ 0.67
Ckap4-202ENSMUST00000167671 Ddx47Q9CWX9 455 aaKnown RBP19.21■□□□□ 0.67
Ckap4-202ENSMUST00000167671 Ascc1Q9D8Z1 356 aaKnown RBP19.21■□□□□ 0.67
Ckap4-202ENSMUST00000167671 Rbbp6P97868 1790 aaKnown RBP19.21■□□□□ 0.67
Ckap4-202ENSMUST00000167671 Akr1b1P45376 316 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Nr1d1Q3UV55 615 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Rnf207Q3V3A7 635 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Ublcp1Q8BGR9 318 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Rab3il1Q8VDV3 383 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Asic2Q925H0 512 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Rnf34Q99KR6 376 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Smtnl1Q99LM3 459 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Golph3Q9CRA5 298 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Lrrc57Q9D1G5 239 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Smco2Q9DA21 347 aa19.21■□□□□ 0.66
Ckap4-202ENSMUST00000167671 DgkiD3YWQ0 1071 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Fam107bQ3TGF2 131 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Wdr70Q3TWF6 657 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Tsg101Q61187 391 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 March6Q6ZQ89 909 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Slc51bQ80WK2 128 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 FignQ9ERZ6 759 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 GakQ99KY4 1305 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 P4hbP09103 509 aaKnown RBP19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Ift20Q61025 132 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 IntS13Q8QZV7 732 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Cdk8Q8R3L8 464 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Msantd4Q91YU3 345 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Alg1Q921Q3 482 aa19.2■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Marf1Q8BJ34 1730 aaKnown RBP19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Psg29Q3URN6 468 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Oxr1Q4KMM3 866 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Fnbp1Q80TY0 616 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Vps37cQ8R105 352 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Saal1Q9D2C2 474 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Spocd1B1ASB6 936 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Rnpc3Q3UZ01 514 aaKnown RBP19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Grm4Q68EF4 912 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Ppm1eQ80TL0 749 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Onecut3Q8K557 490 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Klhl20Q8VCK5 604 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Trim10Q9WUH5 489 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Mast2Q60592 1734 aa19.19■□□□□ 0.66
Ckap4-202ENSMUST00000167671 XlrP05531 208 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Lilrb3P97484 841 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Hdgfl1Q2VPR5 283 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Tmed8Q3UHI4 326 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Znrd1-asQ8R0E5 213 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Kctd10Q922M3 315 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 TbcbQ9D1E6 244 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Trmt112Q9DCG9 125 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 MycbpQ9EQS3 103 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Tnip1Q9WUU8 647 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Orc1Q9Z1N2 840 aaKnown RBP19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Gm28510A0A087WP28 240 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Rsbn1lD3Z0K6 821 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 PltpP55065 493 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Acsbg2Q2XU92 667 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Spg7Q3ULF4 781 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Tmem179Q8BHH9 233 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Spata17Q9D552 379 aa19.18■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Gm1758F6VZZ1 202 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Guca2bO09051 106 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Krt18P05784 423 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Gna15P30678 374 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Tcerg1lQ3B807 590 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Erlin2Q8BFZ9 340 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Q8BWG4 1187 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Tbc1d23Q8K0F1 684 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Lzts2Q91YU6 671 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Dnajc19Q9CQV7 116 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 UvssaQ9D479 717 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Calr3Q9D9Q6 380 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Irx5Q9JKQ4 484 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Ccnt1Q9QWV9 724 aaKnown RBP19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Gm13023A2A8N2 498 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Mybpc2Q5XKE0 1136 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Gas8Q60779 478 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Rexo1Q7TT28 1213 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 OplahQ8K010 1288 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Lgi2Q8K4Z0 550 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Lztr1Q9CQ33 837 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Psrc1Q9D0P7 329 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Krt34Q9D646 392 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Ccdc89Q9DA73 370 aa19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 SetQ9EQU5 289 aaKnown RBP19.17■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Plch1Q4KWH5 1682 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Samd15F6XZJ7 620 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 DnttP09838 530 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Msh3P13705 1091 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Stat4P42228 749 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Setd4P58467 439 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Znf697Q569E7 569 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Fam183bQ5NC57 135 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Krt87Q6IMF0 495 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Csgalnact2Q8C1F4 542 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Cdan1Q8CC12 1239 aa19.16■□□□□ 0.66
Ckap4-202ENSMUST00000167671 Kbtbd4Q8R179 534 aa19.16■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms