RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Eepd1Q3TGW2 569 aa13.78□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Meis1Q60954 390 aa13.78□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Ift122Q6NWV3 1182 aa13.78□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Mettl5Q8K1A0 209 aa13.78□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Sh2b2Q9JID9 621 aa13.78□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Fxr2Q9WVR4 673 aaKnown RBP13.78□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Cfap58B2RW38 873 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Prpmp5E9PXN1 296 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Pik3r1P26450 724 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Hmgcs2P54869 508 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Gm1587Q3UT80 123 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Nipa1Q8BHK1 323 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Arhgef19Q8BWA8 802 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Vps53Q8CCB4 832 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Arl6ip4Q9JM93 229 aa13.77□□□□□ -0.2
Ddx55-202ENSMUST00000111438 Skint7A7XV04 395 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 MyocO70624 490 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Kcnj4P52189 445 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Rasa2P58069 847 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Erbb2P70424 1256 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Fdxacb1Q3UY23 622 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Mrpl58Q8R035 206 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Vps16Q920Q4 839 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Snrnp35Q9D384 244 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Znhit2Q9QY66 399 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Gm10134F6ZQC6 126 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Sh3bp1P55194 680 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Bach2P97303 839 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Tbc1d31Q6NXY1 996 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Bbs9Q811G0 885 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Appl2Q8K3G9 662 aa13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 SetQ9EQU5 289 aaKnown RBP13.77□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Kmt2eQ3UG20 1868 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Mroh8E9PYI4 1049 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Dapk3O54784 448 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Prpf4bQ61136 1007 aaKnown RBP13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Atg4cQ811C2 458 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Trub2Q91WG3 331 aaKnown RBP13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Cntnap2Q9CPW0 1332 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Esr2O08537 530 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 SfnO70456 248 aaKnown RBP13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Nbr1P97432 988 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Rnf157Q3TEL6 685 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Ccna1Q61456 421 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Kcnh3Q9WVJ0 1095 aa13.76□□□□□ -0.21
Ddx55-202ENSMUST00000111438 AunipE9Q6Z5 340 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 ArP19091 899 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 4933427I04RikQ3V053 235 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Znf652Q5DU09 608 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Kif5bQ61768 963 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Fbxo18Q8K2I9 1042 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Barx2O08686 283 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Nr1i2O54915 431 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Kcna2P63141 499 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Tmem63bQ3TWI9 832 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Lrrfip1Q3UZ39 729 aaKnown RBP13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Tfe3Q64092 572 aaKnown RBP13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Clec16aQ80U30 1036 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Olfml1Q8BSH2 233 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Zfp202Q8C879 641 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 CnstQ8CBC4 711 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Sbno2Q7TNB8 1349 aa13.75□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Trim5E9PV98 497 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Gm4758L7N258 96 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Hoxc13P50207 328 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Gpatch11Q3UFS4 262 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Cyp4f37Q3V1F1 546 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Nlrp2Q4PLS0 1046 aaKnown RBP13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Gpd2Q64521 727 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Mtss1lQ6P9S0 715 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Ctdspl2Q8BG15 465 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Zdhhc14Q8BQQ1 489 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Iws1Q8C1D8 766 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Kansl3A2RSY1 903 aaKnown RBP13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Atp8b5A3FIN4 1183 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Bach1P97302 739 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Taf1bP97358 586 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Pbxip1Q3TVI8 727 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 KhsrpQ3U0V1 748 aaKnown RBP13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Trappc3lQ4KL14 181 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Nxf2Q4ZGD8 691 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Mkrn3Q60764 544 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Gpbp1Q6NXH3 473 aaKnown RBP13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Tmem132dQ76HP3 1097 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Prdm4Q80V63 803 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Ifih1Q8R5F7 1025 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Coa7Q921H9 231 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Dnajc18Q9CZJ9 357 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Kcnh7Q9ER47 1195 aa13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Wdr33Q8K4P0 1330 aaKnown RBP13.74□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Tmigd3G3X8R9 209 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Gm10436L7N1Y3 520 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Lrrc36Q3V0M2 755 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 E2f4Q8R0K9 410 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 NapaQ9DB05 295 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Sgpp1Q9JI99 430 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 PdcQ9QW08 244 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Syt5Q9R0N5 386 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Gm3095E9Q058 166 aa13.73□□□□□ -0.21
Ddx55-202ENSMUST00000111438 Pcmtd1P59913 357 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms