RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Cnnm4Q69ZF7 771 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Osbpl2Q8BX94 484 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Taco1Q8K0Z7 294 aaKnown RBP14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Hps3Q91VB4 1002 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Snw1Q9CSN1 536 aaKnown RBP14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Map3k20Q9ESL4 802 aaKnown RBP14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Spryd3E9Q9B3 442 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Rasa2P58069 847 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 StamP70297 548 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 NfiaQ02780 532 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Col19a1Q0VF58 1136 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Samd11Q1RNF8 542 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Xxylt1Q3U4G3 392 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Arhgef16Q3U5C8 713 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Psg29Q3URN6 468 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Igf2bp2Q5SF07 592 aaKnown RBP14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ecm1Q61508 559 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Csrnp2Q8BGQ2 534 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ubxn4Q8VCH8 506 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Hnrnpul1Q8VDM6 859 aaKnown RBP14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Bhmt2Q91WS4 363 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Krt34Q9D646 392 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Sh2b2Q9JID9 621 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Fem1bQ9Z2G0 627 aa14□□□□□ -0.17
Trim50-202ENSMUST00000111180 Rsbn1lD3Z0K6 821 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ankrd35E9Q9D8 996 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Nr5a1P33242 462 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Nlrx1Q3TL44 975 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Miga1Q4QQM5 600 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ddx4Q61496 702 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Cyp2c29Q64458 490 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ift122Q6NWV3 1182 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 BcrQ6PAJ1 1270 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Olfr119Q7TRJ5 321 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Wbp1lQ8BGW2 348 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Cep85Q8BMK0 761 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Dcaf8Q8N7N5 591 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 GlyctkQ8QZY2 523 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Stard7Q8R1R3 373 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Kdm4bQ91VY5 1086 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 LpxnQ99N69 386 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Mxra8Q9DBV4 442 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Arl6ip4Q9JM93 229 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Kcnh3Q9WVJ0 1095 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Fkbp1bQ9Z2I2 108 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 SktA2AQ25 1946 aaKnown RBP13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Tpm3-rs7D3Z2H9 248 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Mctp1E9PV86 951 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Pitpnm1O35954 1243 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Hoxc6P10629 235 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Hoxa11P31311 313 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Stim2P83093 746 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Siah1bQ06985 282 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Fbln1Q08879 705 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 C87499Q3UX49 493 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Dll1Q61483 722 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Fbxo10Q7TQF2 950 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Pgrmc2Q80UU9 217 aaKnown RBP13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ttc7aQ8BGB2 858 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Zfp202Q8C879 641 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Vps16Q920Q4 839 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Cd274Q9EP73 290 aa13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ccnt1Q9QWV9 724 aaKnown RBP13.99□□□□□ -0.17
Trim50-202ENSMUST00000111180 Sbf2E9PXF8 1872 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Kiaa0100Q5SYL3 2234 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Sycp2lA0A0M3U1B0 842 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Nme9A0A1L1SUL6 329 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Lrrc32G3XA59 663 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Dnajb6O54946 365 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Grin1P35438 938 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Pla2g6P97819 807 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 HmgcrQ01237 887 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Brd9Q3UQU0 596 aaKnown RBP13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Prl2c1Q5SVL9 228 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Gigyf2Q6Y7W8 1291 aaKnown RBP13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Usp17leQ7M764 540 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ube2q1Q7TSS2 422 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Myt1Q8CFC2 1127 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Scrn1Q9CZC8 414 aa13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Mrps25Q9D125 171 aaKnown RBP13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 Maged1Q9QYH6 775 aaKnown RBP13.98□□□□□ -0.17
Trim50-202ENSMUST00000111180 HttP42859 3119 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Slc39a2G3X943 309 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Clec11aO88200 328 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Pgk2P09041 417 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 SsbP32067 415 aaKnown RBP13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Rgl1Q60695 768 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Kcnj11Q61743 390 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Kif5bQ61768 963 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Hoxa13Q62424 386 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Ces1Q8VCC2 565 aa13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Mmtag2Q99LX5 260 aaKnown RBP13.97□□□□□ -0.17
Trim50-202ENSMUST00000111180 Gm5737A0A140LI11 423 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Fyb2A2A995 729 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Zscan29E9Q5B4 869 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Zc3h7bF8VPP8 982 aaKnown RBP13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Nr1i2O54915 431 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Pcdha4O88689 947 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Mpp3O88910 568 aa13.96□□□□□ -0.17
Trim50-202ENSMUST00000111180 Mcm3P25206 812 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms