RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Sema3fO88632 785 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Msh3P13705 1091 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cd44P15379 778 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ighmbp2P40694 993 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Setd4P58467 439 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Eme2Q56A04 373 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Csgalnact2Q8C1F4 542 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Dennd2aQ8C4S8 1000 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cdk17Q8K0D0 523 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 1700003F12RikA2AKE5 210 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Hnrnph3D3Z3N4 346 aaKnown RBP12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 LdhaP06151 332 aaKnown RBP12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Vps33bP59016 617 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gcnt1Q09324 428 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Fam196bQ6GQV1 535 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 DaglaQ6WQJ1 1044 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Thap3Q8BJ25 218 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cdan1Q8CC12 1239 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 1700020D05RikQ99PB1 294 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Glra4Q61603 456 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sh3gl1Q62419 368 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Slc20a2Q80UP8 656 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 Dpp8Q80YA7 892 aa12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 AdnpQ9Z103 1108 aaKnown RBP12.71□□□□□ -0.37
Vps54-202ENSMUST00000109578 ChkbO55229 394 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Eps15P42567 897 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 KhsrpQ3U0V1 748 aaKnown RBP12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Fam183bQ5NC57 135 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Krt42Q6IFX2 452 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Exoc3Q6KAR6 755 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Txnrd3Q99MD6 652 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Tbx18Q9EPZ6 613 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Marf1Q8BJ34 1730 aaKnown RBP12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ltn1Q6A009 1767 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Gm28919A0A087WP35 240 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Gjc1P28229 396 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Fdx1P46656 188 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Gad1P48318 593 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Kctd1Q5M956 257 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Trpc6Q61143 930 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Pacsin1Q61644 441 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ces1eQ64176 562 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 ParnQ8VDG3 624 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Creb3l3Q91XE9 479 aa12.71□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ltbp2O08999 1813 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Arhgap4B1AUY3 965 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Aknad1E9Q8N6 675 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ncapg2Q6DFV1 1138 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Olfr832Q7TRG9 312 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Rnf187Q8BFX1 236 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Kiaa0319lQ8K135 1048 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Mmgt1Q8K273 131 aaKnown RBP12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 IntS13Q8QZV7 732 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Rab3il1Q8VDV3 383 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Golph3Q9CRA5 298 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ribc1Q9D0B8 379 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Fam173bQ9D1Z3 247 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ccdc83Q9D4V3 305 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Trim10Q9WUH5 489 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Arhgap6O54834 987 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Mtmr4Q91XS1 1190 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Asic2Q925H0 512 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Nxnl2Q9D531 156 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Fxr2Q9WVR4 673 aaKnown RBP12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Gm5114W4VSN8 858 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Fbln1Q08879 705 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Bbof1Q3V079 533 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Sco1Q5SUC9 284 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 March6Q6ZQ89 909 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Lca5Q80ST9 704 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Traf3ip3Q8C0G2 513 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Kbtbd4Q8R179 534 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Lrrc57Q9D1G5 239 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Trmt44Q9D2Q2 713 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Slc12a7Q9WVL3 1083 aa12.7□□□□□ -0.38
Vps54-202ENSMUST00000109578 Krt18P05784 423 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Stat3P42227 770 aaKnown RBP12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 HmmrQ00547 794 aaKnown RBP12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 NntQ61941 1086 aaKnown RBP12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Rexo1Q7TT28 1213 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Spata16Q8C636 571 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Erlin1Q91X78 346 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 CoasyQ9DBL7 563 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Guca2bO09051 106 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Il27raO70394 623 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 MybP06876 636 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Fhdc1Q3ULZ2 1149 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 NfrkbQ6PIJ4 1296 aaKnown RBP12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Tcp10aQ80W76 438 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ccdc181Q80ZU5 509 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 SltmQ8CH25 1031 aaKnown RBP12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Bbs7Q8K2G4 715 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Nlrp5Q9R1M5 1163 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Trim43aQ3TL54 445 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Hdhd2Q3UGR5 259 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Rnf207Q3V3A7 635 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Kctd19Q562E2 927 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Ube2sQ921J4 223 aa12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Gtf2iQ9ESZ8 998 aaKnown RBP12.69□□□□□ -0.38
Vps54-202ENSMUST00000109578 Akr1b10G5E895 316 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms