RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Oxr1Q4KMM3 866 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 HarsQ61035 509 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Bola3Q8CEI1 110 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Ap2b1Q9DBG3 937 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Elmsan1E9Q2I4 1089 aaKnown RBP13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Idh1O88844 414 aaKnown RBP13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Tfdp1Q08639 410 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 HiraQ61666 1015 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Spata4Q8K3V1 295 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Tada3Q8R0L9 432 aa13.4□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 LnpkQ7TQ95 425 aa13.4□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zfp418Q8BFS8 652 aa13.4□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Arl2bpQ9D385 163 aa13.4□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Hyou1Q9JKR6 999 aaKnown RBP13.4□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pex3Q9QXY9 372 aa13.4□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 NpatQ8BMA5 1420 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cyp11b2P15539 500 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pla2g4eQ50L42 875 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zbtb8osQ505B7 168 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Trim32Q8CH72 655 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm3415J3QMS8 315 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Hsdl2Q2TPA8 490 aaKnown RBP13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ddx42Q810A7 929 aaKnown RBP13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 HnrnprQ8VHM5 632 aaKnown RBP13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm3404Q9D506 307 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rmdn1Q9DCV4 305 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Lmtk2Q3TYD6 1471 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Axin2O88566 840 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Mettl17Q3U2U7 461 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pdik1lQ8QZR7 341 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Slc12a6Q924N4 1150 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm5580A0A0N4SVP8 411 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Tcp11Q01755 566 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Hps3Q91VB4 1002 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pip4k2cQ91XU3 421 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ppp1r2Q9DCL8 206 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Dctpp1Q9QY93 170 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Kmt5aQ2YDW7 349 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ints4Q8CIM8 964 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 MrgbpQ9DAT2 204 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Slc12a7Q9WVL3 1083 aa13.39□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Caprin1Q60865 707 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cog4Q8R1U1 785 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rpap2Q8VC34 614 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Phkg2Q9DB30 406 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 3425401B19RikD3Z1D3 1412 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Map3k12Q60700 888 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Prkab2Q6PAM0 271 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Frmd4bQ920B0 1035 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ifi35Q9D8C4 286 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cbx6Q9DBY5 414 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Krt27Q9Z320 448 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Znf335A2A5K6 1337 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Vmn2r68L7N2B3 851 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cep70Q6IQY5 616 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gdap1l1Q8VE33 370 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ahcyl2Q68FL4 613 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Dhx37Q6NZL1 1150 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Them5Q9CQJ0 248 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rlbp1Q9Z275 317 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Frmpd4A2AFR3 1320 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Adcy9P51830 1353 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zfp113Q8C689 439 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 LratQ9JI60 231 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ncoa3O09000 1398 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Fkbp6Q91XW8 327 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Msh6P54276 1358 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Supt3B0QZW4 406 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Il15P48346 162 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Hspd1P63038 573 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Kctd16Q5DTY9 427 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Fra10ac1Q8BP78 315 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Mei4Q8BRM6 389 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cog5Q8C0L8 829 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rrp15Q9CYX7 281 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Tulp1Q9Z273 543 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rreb1Q3UH06 1700 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Eps15l1Q60902 907 aaKnown RBP13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Olfr118Q7TRJ6 321 aa13.38□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Myh3P13541 1940 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Kcnv2Q8CFS6 562 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pls3Q99K51 630 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 AacsQ9D2R0 672 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Slc25a24Q8BMD8 475 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Hecw1Q8K4P8 1604 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Lonrf3Q9D4H7 753 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rsbn1lD3Z0K6 821 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Mroh8E9PYI4 1049 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Kctd10Q922M3 315 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Dpp7Q9ET22 506 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Fyb2A2A995 729 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Vav2Q60992 868 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Tigd4Q8BUZ3 513 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Psma8Q9CWH6 250 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pex11aQ9Z211 246 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Clec4gQ8BNX1 294 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Kdm8Q9CXT6 414 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cpb1B2RS76 415 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Apol11bE9PUZ0 337 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms