RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 IntS13Q8QZV7 732 aa16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Luc7lQ9CYI4 371 aaKnown RBP16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 1700109H08RikQ9D9C0 210 aa16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 AllcQ9JHX6 414 aa16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Fmnl1Q9JL26 1094 aa16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Txnrd1Q9JMH6 613 aa16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Myh8P13542 1937 aa16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Zfp142G5E869 1843 aa16.29■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Pet2A2AHY8 747 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Eftud2O08810 971 aaKnown RBP16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 VimP20152 466 aaKnown RBP16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Nap1l2P51860 460 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Kcnma1Q08460 1209 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Nlrx1Q3TL44 975 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Xlr3bQ6P205 226 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Ankrd24Q80VM7 985 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Cnot10Q8BH15 744 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Scfd2Q8BTY8 684 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Ppp2r5dQ91V89 594 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Zbtb1Q91VL9 713 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Rnf34Q99KR6 376 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 1700020D05RikQ99PB1 294 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 PdiltQ9DAN1 588 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Arpp21Q9DCB4 807 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Nav1Q8CH77 1875 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Wdr72D3YYM4 1114 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Becn2P0DM65 447 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 ProcP33587 460 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Psmd1Q3TXS7 953 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Rnf207Q3V3A7 635 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Myo19Q5SV80 963 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Znf496Q5SXI5 585 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 LrmpQ60664 539 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Atf3Q60765 181 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 EregQ61521 162 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Madcam1Q61826 405 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 RalylQ8BTF8 293 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Ccdc87Q8CDL9 855 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Hs2st1Q8R3H7 356 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Abcf2Q99LE6 628 aaKnown RBP16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Tsnaxip1Q99P25 704 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Fam133bQ9CVI2 245 aaKnown RBP16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Ccdc105Q9D4K7 499 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Clip2Q9Z0H8 1047 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Nfs1Q9Z1J3 459 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Myh15E9Q264 1925 aa16.28■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Epb41l4aP52963 686 aa16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Rgs9bpQ148R9 237 aa16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Zbed4Q80WQ9 1168 aa16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Epha10Q8BYG9 1007 aa16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Stx17Q9D0I4 301 aa16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Cacna2d3Q9Z1L5 1091 aa16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Orc1Q9Z1N2 840 aaKnown RBP16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Aox3G3X982 1335 aa16.27■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Magea10A2AMW4 325 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ercc5P35689 1170 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 PltpP55065 493 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Tspyl3Q3UYP3 334 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Znf827Q505G8 1078 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ppp2r2aQ6P1F6 447 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 NfrkbQ6PIJ4 1296 aaKnown RBP16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Susd4Q8BH32 490 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Usp20Q8C6M1 916 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Slc35f6Q8VE96 372 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 VillQ91YD6 859 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 SarnpQ9D1J3 210 aaKnown RBP16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Prpf40aQ9R1C7 953 aaKnown RBP16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Cul1Q9WTX6 776 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Net1Q9Z206 595 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Myh3P13541 1940 aa16.27■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Nova2D3YVV7 556 aaKnown RBP16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 DgkiD3YWQ0 1071 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Chmp6P0C0A3 200 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Abcb4P21440 1276 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ttf2Q5NC05 1138 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Rbm15bQ6PHZ5 887 aaKnown RBP16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Armcx3Q8BHS6 379 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 DlatQ8BMF4 642 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 OplahQ8K010 1288 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Klhl20Q8VCK5 604 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 ErmapQ9JLN5 566 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Mtmr9Q9Z2D0 545 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Shank3Q4ACU6 1730 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Samd15F6XZJ7 620 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Tuft1O08970 390 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Slc8a1P70414 970 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Pacsin1Q61644 441 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Dcaf5Q80T85 946 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ttll4Q80UG8 1193 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 PreplQ8C167 725 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 SncbQ91ZZ3 133 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Adgrf5G5E8Q8 1348 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Pitpnm2Q6ZPQ6 1335 aa16.26■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Msh3P13705 1091 aa16.25■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Usp53P15975 1069 aa16.25■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Rps6ka1P18653 724 aa16.25■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Casp1P29452 402 aa16.25■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Nhej1Q3KNJ2 295 aa16.25■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Mdh1bQ5F204 500 aa16.25■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Anks6Q6GQX6 883 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms