RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Rint1Q8BZ36 792 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Gimap7Q8R379 293 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Trub2Q91WG3 331 aaKnown RBP19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Glrx3Q9CQM9 337 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ssr1Q9CY50 286 aaKnown RBP19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Sipa1l3G3X9J0 1776 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Nova2D3YVV7 556 aaKnown RBP19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Akr1c19G3X9Y6 323 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Lmnb2P21619 596 aaKnown RBP19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Lig1P37913 916 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Pls1Q3V0K9 630 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 PrimpolQ6P1E7 537 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 FtoQ8BGW1 502 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 HyiQ8R1F5 277 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cap2Q9CYT6 476 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Rwdd2aQ9D9S3 292 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ankrd31A0A140LI88 1765 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Btbd18A0A0A6YY25 723 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Mnat1P51949 309 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ccdc138Q0VF22 680 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Mtss1lQ6P9S0 715 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Fmnl3Q6ZPF4 1028 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Smtnl1Q99LM3 459 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Capn15Q9JLG8 1095 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cul1Q9WTX6 776 aa19.52■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Casp4P70343 373 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Gjb6P70689 261 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Trmt1Q3TX08 663 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Smg7Q5RJH6 1138 aaKnown RBP19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Dnajc8Q6NZB0 253 aaKnown RBP19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Naa25Q8BWZ3 972 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ccdc87Q8CDL9 855 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Luc7lQ9CYI4 371 aaKnown RBP19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Arhgap33Q80YF9 1305 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Gm382B1AXN3 1250 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 DgkiD3YWQ0 1071 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Samd15F6XZJ7 620 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 TraddQ3U0V2 310 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Kiaa1211Q5PR69 1207 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Rnf34Q99KR6 376 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Foxo4Q9WVH3 505 aa19.51■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Gm45208A0A140LJ36 292 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Plekhd1B2RPU2 505 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Stag2O35638 1231 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Men1O88559 611 aaKnown RBP19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Epb41l4aP52963 686 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Tbc1d2bQ3U0J8 965 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Mum1l1Q4VA55 681 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Gas8Q60779 478 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Tekt3Q6X6Z7 490 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 ParnQ8VDG3 624 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Tmed5Q9CXE7 229 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Stx17Q9D0I4 301 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 UvssaQ9D479 717 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Serpinb12Q9D7P9 423 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Tacc2Q9JJG0 1149 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Prpf40aQ9R1C7 953 aaKnown RBP19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Cog1Q9Z160 980 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Greb1lB9EJV3 1913 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Fam129cD3YZB0 591 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Gm5814J3QP80 125 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Stx8O88983 236 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 PltpP55065 493 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 MagohP61327 146 aaKnown RBP19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Rnf207Q3V3A7 635 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ehmt1Q5DW34 1296 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Kcna6Q61923 529 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 PodnQ7TQ62 611 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 VillQ91YD6 859 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 MagohbQ9CQL1 146 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Mrfap1Q9CQL7 125 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Nop56Q9D6Z1 580 aaKnown RBP19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Sept14Q9DA97 430 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Serpinb6cW4VSP4 379 aa19.5■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Man1a2P39098 641 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 ChukQ60680 745 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ccna1Q61456 421 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Sorbs1Q62417 1290 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 NfrkbQ6PIJ4 1296 aaKnown RBP19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ankrd24Q80VM7 985 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Tcp10aQ80W76 438 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Rbm19Q8R3C6 952 aaKnown RBP19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Lrrc59Q922Q8 307 aaKnown RBP19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Snrnp35Q9D384 244 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Rexo2Q9D8S4 237 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ankrd2Q9WV06 328 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Myh3P13541 1940 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Sik1Q60670 779 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Sdccag8Q80UF4 717 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ccdc134Q8C7V8 229 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ppp1r3gQ9CW07 347 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 ArpinQ9D0A3 226 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Pramef12Q9D2F1 463 aa19.49■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Trappc11B2RXC1 1133 aa19.48■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Gdap1O88741 358 aa19.48■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Dynll1P63168 89 aa19.48■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Ddx17Q501J6 650 aaKnown RBP19.48■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 HnrnpdQ60668 355 aaKnown RBP19.48■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 EregQ61521 162 aa19.48■□□□□ 0.71
Sqstm1-201ENSMUST00000015981 Anks6Q6GQX6 883 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms