RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Vps33bP59016 617 aa17.92■□□□□ 0.46
Trim28-201ENSMUST00000005705 Kremen1Q99N43 473 aa17.92■□□□□ 0.46
Trim28-201ENSMUST00000005705 DnttP09838 530 aa17.92■□□□□ 0.46
Trim28-201ENSMUST00000005705 Cep70Q6IQY5 616 aa17.92■□□□□ 0.46
Trim28-201ENSMUST00000005705 BcrQ6PAJ1 1270 aa17.92■□□□□ 0.46
Trim28-201ENSMUST00000005705 Folh1O35409 752 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Serpinb6dQ3UWK8 375 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Sema4bQ62179 823 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Naa35Q6PHQ8 725 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 NfrkbQ6PIJ4 1296 aaKnown RBP17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Actn1Q7TPR4 892 aaKnown RBP17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Dnajc7Q9QYI3 494 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Marf1Q8BJ34 1730 aaKnown RBP17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Stim2P83093 746 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Nsrp1Q5NCR9 542 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 SetQ9EQU5 289 aaKnown RBP17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Znf609Q8BZ47 1413 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Lbhd1A0A087WPA0 259 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 MlxipQ2VPU4 917 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Papd7Q6PB75 542 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Foxo6Q70KY4 559 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ublcp1Q8BGR9 318 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Kiaa0319lQ8K135 1048 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Cgref1Q8R1U2 281 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 NapaQ9DB05 295 aa17.91■□□□□ 0.46
Trim28-201ENSMUST00000005705 Tubb4bP68372 445 aaKnown RBP17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Surf6P70279 355 aaKnown RBP17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Trip13Q3UA06 432 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Phf8Q80TJ7 1023 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 CpzQ8R4V4 654 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Rab3il1Q8VDV3 383 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 BcamQ9R069 622 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 AdnpQ9Z103 1108 aaKnown RBP17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Serpina16D3Z660 418 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Tubb5P99024 444 aaKnown RBP17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Q32P12 615 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Nlrx1Q3TL44 975 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Dcaf17Q3TUL7 519 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Pacsin1Q61644 441 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 LgsnQ8CIX8 563 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Klra17Q9JMA4 273 aa17.9■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ankrd35E9Q9D8 996 aa17.89■□□□□ 0.46
Trim28-201ENSMUST00000005705 Lig3P97386 1015 aa17.89■□□□□ 0.46
Trim28-201ENSMUST00000005705 Glra4Q61603 456 aa17.89■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ppp2r5bQ6PD28 497 aa17.89■□□□□ 0.46
Trim28-201ENSMUST00000005705 Lrit1Q8K099 624 aa17.89■□□□□ 0.46
Trim28-201ENSMUST00000005705 BC051142Q3V0M8 400 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Tnni3kQ5GIG6 834 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Dennd2aQ8C4S8 1000 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Enox2Q8R0Z2 598 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 CalcbQ99MP3 130 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Gm28919A0A087WP35 240 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Cpsf2O35218 782 aaKnown RBP17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Chrm1P12657 460 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Scg2Q03517 617 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ddx49Q4FZF3 480 aaKnown RBP17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Cep131Q62036 1060 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Exoc3Q6KAR6 755 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Herc4Q6PAV2 1057 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Erlin2Q8BFZ9 340 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 1700020D05RikQ99PB1 294 aa17.89■□□□□ 0.45
Trim28-201ENSMUST00000005705 Pcif1P59114 706 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Kif22Q3V300 660 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Igf2bp2Q5SF07 592 aaKnown RBP17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Specc1Q5SXY1 1067 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Hoxa13Q62424 386 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 NkrfQ8BY02 690 aaKnown RBP17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Lztr1Q9CQ33 837 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Dydc2Q9D3X8 139 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 PfasQ5SUR0 1337 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 E9QMW4 1145 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Lilrb3P97484 841 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Rapgef1Q3UHC1 1224 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Vipas39Q8BGQ1 491 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Tmem179Q8BHH9 233 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Josd2Q9CR30 188 aa17.88■□□□□ 0.45
Trim28-201ENSMUST00000005705 Tcerg1lQ3B807 590 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Spg7Q3ULF4 781 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Krt74Q6IFZ9 495 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Haus6Q6NV99 933 aaKnown RBP17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Olfr832Q7TRG9 312 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Zbed4Q80WQ9 1168 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Znf18Q810A1 556 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ccdc38Q8CDN8 563 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Txnrd3Q99MD6 652 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Psmd10Q9Z2X2 231 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 DohhA0A1Y7VJ29 135 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Il27raO70394 623 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Slc9a2Q3ZAS0 814 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Fkbp3Q62446 224 aaKnown RBP17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Igdcc3Q8BQC3 813 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Tbc1d23Q8K0F1 684 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Lgi2Q8K4Z0 550 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ppp2r5dQ91V89 594 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Arfgap2Q99K28 520 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ndst4Q9EQW8 872 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Hyou1Q9JKR6 999 aaKnown RBP17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Tmtc2Q56A06 836 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 PolrmtQ8BKF1 1207 aaKnown RBP17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 AopepQ8BXQ6 817 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms