RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Thap3Q8BJ25 218 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Lmbrd1Q8K0B2 537 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 ParnQ8VDG3 624 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Erlin1Q91X78 346 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Lztfl1Q9JHQ5 299 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ltbp1Q8CG19 1712 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Eif6O55135 245 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Recql4Q75NR7 1216 aaKnown RBP20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 NkrfQ8BY02 690 aaKnown RBP20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ccnt1Q9QWV9 724 aaKnown RBP20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Myo1cQ9WTI7 1063 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ubr3Q5U430 1889 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Trim43aQ3TL54 445 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ankrd13cQ3UX43 541 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ggt6Q6PDE7 497 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Zbtb39Q6PDK0 712 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ttc7aQ8BGB2 858 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Spata16Q8C636 571 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Dnajc17Q91WT4 303 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Slc20a2Q80UP8 656 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tesk2Q8VCT9 570 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ddah1Q9CWS0 285 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ccdc83Q9D4V3 305 aa20.72■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Klra1P20937 262 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Stat4P42228 749 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Nf2P46662 596 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 NntQ61941 1086 aaKnown RBP20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Rhbdf1Q6PIX5 856 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Rexo1Q7TT28 1213 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Dpp8Q80YA7 892 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Gtf3c5Q8R2T8 520 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Haus2Q9CQS9 234 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tom1O88746 492 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Fgd3O88842 733 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Mx1P09922 631 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Sept2P42208 361 aaKnown RBP20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Actn4P57780 912 aaKnown RBP20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ppm1eQ80TL0 749 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 KhnynQ80U38 671 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Matr3Q8K310 846 aaKnown RBP20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ubxn1Q922Y1 297 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Lrrc57Q9D1G5 239 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tmem191cQ9JJB1 302 aa20.71■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ankrd35E9Q9D8 996 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Rfpl4bJ3QPR6 266 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Kifc2O08672 792 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Adam7O35227 789 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Rasa3Q60790 834 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Cd37Q61470 281 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Sh3gl1Q62419 368 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Adcy2Q80TL1 1090 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Lrit1Q8K099 624 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Bbs7Q8K2G4 715 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Nr1i3O35627 358 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Eef2P58252 858 aaKnown RBP20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Cct5P80316 541 aaKnown RBP20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ica1lQ3TY65 431 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ttbk2Q3UVR3 1243 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Oxr1Q4KMM3 866 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Islr2Q5RKR3 745 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Cog5Q8C0L8 829 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Klhl20Q8VCK5 604 aa20.7■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Pitpnm2Q6ZPQ6 1335 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Akap2O54931 893 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Stxbp3Q60770 592 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Mapk6Q61532 720 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Rbm26Q6NZN0 1012 aaKnown RBP20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Trim6Q8BGE7 488 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Trmt2aQ8BNV1 574 aaKnown RBP20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Sgsm1Q8BPQ7 1093 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Spats2Q8K1N4 545 aaKnown RBP20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Arhgap33Q80YF9 1305 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Col11a2Q64739 1736 aa20.69■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gm5169Q5M8P2 212 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Secisbp2lQ6A098 1086 aaKnown RBP20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Haus6Q6NV99 933 aaKnown RBP20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Snip1Q8BIZ6 383 aaKnown RBP20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Ttll1Q91V51 423 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 PpanQ91YU8 470 aaKnown RBP20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Txnrd3Q99MD6 652 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Cul5Q9D5V5 780 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Arhgap4B1AUY3 965 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Nedd4P46935 887 aaKnown RBP20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Wdhd1P59328 1117 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 HmmrQ00547 794 aaKnown RBP20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Tnfaip8l3Q3TBL6 204 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Lrrcc1Q69ZB0 1026 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Traf3ip3Q8C0G2 513 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Pym1Q8CHP5 203 aaKnown RBP20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Zbed3Q9D0L1 228 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Saal1Q9D2C2 474 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Nxnl2Q9D531 156 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Calr3Q9D9Q6 380 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Flt1P35969 1333 aa20.68■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Gm42641I6L9G2 585 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Akr1b1P45376 316 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Wee1P47810 646 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Olfr832Q7TRG9 312 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 AtripQ8BMG1 785 aa20.67■□□□□ 0.9
Shkbp1-201ENSMUST00000003857 Rab11fip4Q8BQP8 635 aa20.67■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms