RNA–Protein interactions for RNA: tW(CCA)P

tW(CCA)P, Transcript of Tryptophan tRNA (tRNA-Trp), predicted by tRNAscan-SE analysis, yeastyeast

Gene tW(CCA)P, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tW(CCA)PtW(CCA)P UGP1P32861 499 aaKnown RBP2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P OAR1P35731 278 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P EAP1P36041 632 aaKnown RBP2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P SPC42P36094 363 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P SPP381P38282 291 aaPredicted RBP2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P OM14P38325 134 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P TDA11P38854 504 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P GGC1P38988 300 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P YER034WP40022 185 aaKnown RBP2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P EMP65P40085 556 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P MEP1P40260 492 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P NEO1P40527 1151 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P YJR115WP47152 169 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P STE24P47154 453 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P BIO3P50277 480 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P EFM5P53200 248 aaKnown RBP2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P YNL092WP53934 400 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P MSC1Q03104 513 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P VPS60Q03390 229 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P GAD1Q04792 585 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P YPR109WQ06104 294 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P SEC10Q06245 871 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P RRP40Q08285 240 aaKnown RBP2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P RAX1Q08760 435 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P AKR2Q12013 749 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P RIO1Q12196 484 aaKnown RBP2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P YDL177CQ12257 170 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P MHT1Q12525 324 aa2.5□□□□□ -2.01
tW(CCA)PtW(CCA)P COX1P00401 534 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P DST1P07273 309 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P ADH4P10127 382 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P HOM3P10869 527 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P KAR1P11927 433 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P PRP2P20095 876 aaPredicted RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P GBP2P25555 427 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
tW(CCA)PtW(CCA)P YCR090CP25654 182 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P DPB3P27344 201 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P FAA1P30624 700 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P PHA2P32452 334 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P CDC5P32562 705 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SUI1P32911 108 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P CBF5P33322 483 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
tW(CCA)PtW(CCA)P RMA1P36001 430 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P YKR078WP36158 585 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P OMA1P36163 345 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P ASC1P38011 319 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P MOH1P38191 138 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P BMT2P38278 337 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P CHS7P38843 316 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SPC97P38863 823 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P OAF1P39720 1047 aaPredicted RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P RPS26AP39938 119 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P RPS26BP39939 119 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SAP1P39955 897 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P TPA1P40032 644 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SER3P40054 469 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P GID8P40208 455 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P YIL152WP40455 235 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P UTP25P40498 721 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SEC28P40509 296 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P CUP9P41817 306 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SNO3P43544 222 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P FMP32P43557 207 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P UBX6P47049 396 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P URB2P47108 1174 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P HOC1P47124 396 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P PRP31P49704 494 aaPredicted RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P AIF1P52923 378 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P VPS73P53142 486 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P NNF2P53253 936 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SHY1P53266 389 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P RPL22BP56628 122 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P PRP38Q00723 242 aaPredicted RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P OAZ1Q02803 292 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P SRP1Q02821 542 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P TAF11Q04226 346 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P APC4Q04601 652 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P HDA3Q06623 655 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P OMS1Q06668 471 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P CYK3Q07533 885 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P FRA1Q07825 749 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P XYL2Q07993 356 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P REX4Q08237 289 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P VHS3Q08438 674 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P YLR053CQ12026 108 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P RUD3Q12234 484 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P RUP1Q12242 671 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P RRP42Q12277 265 aaPredicted RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P MMP1Q12372 583 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P YPR064WQ12492 139 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P KCS1Q12494 1050 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P RMP1Q12530 201 aa2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P NOP14Q99207 810 aaKnown RBP2.49□□□□□ -2.01
tW(CCA)PtW(CCA)P ARG4P04076 463 aaPredicted RBP2.48□□□□□ -2.01
tW(CCA)PtW(CCA)P HXK2P04807 486 aaKnown RBP2.48□□□□□ -2.01
tW(CCA)PtW(CCA)P COS2P0CX12 379 aa2.48□□□□□ -2.01
tW(CCA)PtW(CCA)P COS3P0CX13 379 aa2.48□□□□□ -2.01
tW(CCA)PtW(CCA)P GCY1P14065 312 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
tW(CCA)PtW(CCA)P VPS33P20795 691 aa2.48□□□□□ -2.01
tW(CCA)PtW(CCA)P BAS1P22035 811 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms