RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 RSM22P36056 628 aa1.2□□□□□ -2.22
snR49snR49 TCM62P38228 572 aaKnown RBP1.2□□□□□ -2.22
snR49snR49 CIN4P39110 191 aa1.2□□□□□ -2.22
snR49snR49 SEO1P39709 593 aa1.2□□□□□ -2.22
snR49snR49 ACA1P39970 489 aa1.2□□□□□ -2.22
snR49snR49 FAR3P46671 204 aa1.2□□□□□ -2.22
snR49snR49 MTM1P53320 366 aa1.2□□□□□ -2.22
snR49snR49 ECM11Q04110 302 aa1.2□□□□□ -2.22
snR49snR49 CUE5Q08412 411 aaKnown RBP1.2□□□□□ -2.22
snR49snR49 YPL199CQ08954 240 aa1.2□□□□□ -2.22
snR49snR49 TRM8Q12009 286 aa1.2□□□□□ -2.22
snR49snR49 YPQ1Q12010 308 aa1.2□□□□□ -2.22
snR49snR49 NFT1P0CE68 1218 aa1.19□□□□□ -2.22
snR49snR49 SSB1P11484 613 aaKnown RBP1.19□□□□□ -2.22
snR49snR49 MFT1P33441 392 aaKnown RBP1.19□□□□□ -2.22
snR49snR49 SSB2P40150 613 aaKnown RBP1.19□□□□□ -2.22
snR49snR49 AAD10P47182 288 aa1.19□□□□□ -2.22
snR49snR49 PAP2P53632 584 aaKnown RBP1.19□□□□□ -2.22
snR49snR49 THP1Q08231 455 aa1.19□□□□□ -2.22
snR49snR49 SAM1P10659 382 aaKnown RBP1.18□□□□□ -2.22
snR49snR49 SAM2P19358 384 aaKnown RBP1.18□□□□□ -2.22
snR49snR49 SPS22P25380 463 aa1.18□□□□□ -2.22
snR49snR49 YBR144CP34215 104 aa1.18□□□□□ -2.22
snR49snR49 SHP1P34223 423 aa1.18□□□□□ -2.22
snR49snR49 BNA4P38169 460 aa1.18□□□□□ -2.22
snR49snR49 UTP18P40362 594 aaPredicted RBP1.18□□□□□ -2.22
snR49snR49 SSU1P41930 458 aa1.18□□□□□ -2.22
snR49snR49 OGG1P53397 376 aaPredicted RBP1.18□□□□□ -2.22
snR49snR49 CWC25P53854 179 aaKnown RBP1.18□□□□□ -2.22
snR49snR49 BLS1Q06071 122 aa1.18□□□□□ -2.22
snR49snR49 RIX7Q07844 837 aaKnown RBP1.18□□□□□ -2.22
snR49snR49 SSP2Q08646 371 aa1.18□□□□□ -2.22
snR49snR49 MES1P00958 751 aaKnown RBP1.17□□□□□ -2.22
snR49snR49 YCR100CP25606 316 aa1.17□□□□□ -2.22
snR49snR49 UME6P39001 836 aa1.17□□□□□ -2.22
snR49snR49 BNA1P47096 177 aa1.17□□□□□ -2.22
snR49snR49 MDG1P53885 366 aa1.17□□□□□ -2.22
snR49snR49 HXT11P54862 567 aa1.17□□□□□ -2.22
snR49snR49 YEF3P16521 1044 aaKnown RBP1.16□□□□□ -2.22
snR49snR49 SSE2P32590 693 aaKnown RBP1.16□□□□□ -2.22
snR49snR49 XRS2P33301 854 aa1.16□□□□□ -2.22
snR49snR49 RIB5P38145 238 aa1.16□□□□□ -2.22
snR49snR49 ZPR1P53303 486 aaKnown RBP1.16□□□□□ -2.22
snR49snR49 HST1P53685 503 aa1.16□□□□□ -2.22
snR49snR49 CBK1P53894 756 aa1.16□□□□□ -2.22
snR49snR49 ODC1Q03028 310 aa1.16□□□□□ -2.22
snR49snR49 IRC25Q07951 179 aa1.16□□□□□ -2.22
snR49snR49 TCO89Q08921 799 aa1.16□□□□□ -2.22
snR49snR49 YPL272CQ08984 517 aa1.16□□□□□ -2.22
snR49snR49 MF(ALPHA)1P01149 165 aa1.15□□□□□ -2.23
snR49snR49 SNF1P06782 633 aaKnown RBP1.15□□□□□ -2.23
snR49snR49 ARD1P07347 238 aaPredicted RBP1.15□□□□□ -2.23
snR49snR49 ELO2P25358 347 aa1.15□□□□□ -2.23
snR49snR49 NPL6P32832 435 aa1.15□□□□□ -2.23
snR49snR49 UBP11P36026 717 aa1.15□□□□□ -2.23
snR49snR49 MRPS9P38120 278 aa1.15□□□□□ -2.23
snR49snR49 YBR225WP38321 900 aa1.15□□□□□ -2.23
snR49snR49 RCK2P38623 610 aa1.15□□□□□ -2.23
snR49snR49 TIM17P39515 158 aa1.15□□□□□ -2.23
snR49snR49 ISC1P40015 477 aaKnown RBP1.15□□□□□ -2.23
snR49snR49 ALK1P43633 760 aaKnown RBP1.15□□□□□ -2.23
snR49snR49 COQ9Q05779 260 aa1.15□□□□□ -2.23
snR49snR49 LUC7Q07508 261 aaPredicted RBP1.15□□□□□ -2.23
snR49snR49 YOL087CQ99247 1116 aa1.15□□□□□ -2.23
snR49snR49 TRP1P00912 224 aa1.14□□□□□ -2.23
snR49snR49 ARA1P38115 344 aa1.14□□□□□ -2.23
snR49snR49 MAL33P38157 468 aa1.14□□□□□ -2.23
snR49snR49 AIM10P39965 576 aaKnown RBP1.14□□□□□ -2.23
snR49snR49 HEF3P53978 1044 aaKnown RBP1.14□□□□□ -2.23
snR49snR49 TOF2Q02208 771 aa1.14□□□□□ -2.23
snR49snR49 AIM32Q04689 311 aa1.14□□□□□ -2.23
snR49snR49 VID22Q05934 901 aa1.14□□□□□ -2.23
snR49snR49 MRP13P12686 339 aa1.13□□□□□ -2.23
snR49snR49 ART10P18634 518 aaKnown RBP1.13□□□□□ -2.23
snR49snR49 YBR137WP38276 179 aa1.13□□□□□ -2.23
snR49snR49 PFS2P42841 465 aaKnown RBP1.13□□□□□ -2.23
snR49snR49 TRS85P46944 698 aa1.13□□□□□ -2.23
snR49snR49 AIM22P47051 409 aa1.13□□□□□ -2.23
snR49snR49 PCP1P53259 346 aa1.13□□□□□ -2.23
snR49snR49 RAD61Q99359 647 aa1.13□□□□□ -2.23
snR49snR49 PSK1P31374 1356 aa1.12□□□□□ -2.23
snR49snR49 ATP4P05626 244 aa1.12□□□□□ -2.23
snR49snR49 CYC3P06182 269 aa1.12□□□□□ -2.23
snR49snR49 YAR066WP0CX18 203 aa1.12□□□□□ -2.23
snR49snR49 YHR214WP0CX19 203 aa1.12□□□□□ -2.23
snR49snR49 POP5P28005 173 aa1.12□□□□□ -2.23
snR49snR49 ATP11P32453 318 aa1.12□□□□□ -2.23
snR49snR49 FMT1P32785 401 aa1.12□□□□□ -2.23
snR49snR49 AUR1P36107 401 aaPredicted RBP1.12□□□□□ -2.23
snR49snR49 MST28P39552 234 aa1.12□□□□□ -2.23
snR49snR49 MRP51Q02950 344 aa1.12□□□□□ -2.23
snR49snR49 PPM1Q04081 328 aa1.12□□□□□ -2.23
snR49snR49 SNO4Q04902 237 aa1.12□□□□□ -2.23
snR49snR49 HSP33Q08914 237 aaKnown RBP1.12□□□□□ -2.23
snR49snR49 HSP32Q08992 237 aa1.12□□□□□ -2.23
snR49snR49 PLP2Q12017 286 aa1.12□□□□□ -2.23
snR49snR49 IME2P32581 645 aa1.11□□□□□ -2.23
snR49snR49 CSE2P33308 149 aa1.11□□□□□ -2.23
snR49snR49 MIG3P39943 394 aa1.11□□□□□ -2.23
snR49snR49 YER186CP40101 306 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms