RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	SCS2	P40075	244 aa	Known RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	RFC4	P40339	323 aa	Known RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	RTA1	P53047	317 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	YGL138C	P53122	345 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	YSA1	Q01976	231 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	RPL6A	Q02326	176 aa	Known RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	NUP116	Q02630	1113 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	YOL107W	Q12239	342 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	DCN1	Q12395	269 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	QCR2	P07257	368 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	COS2	P0CX12	379 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	COS3	P0CX13	379 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	EST1	P17214	699 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SEC39	YLR440C	MRPL33	P20084	86 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	AGP1	P25376	633 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	PDB1	P32473	366 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	SSE2	P32590	693 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	CYC2	P38909	366 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	MNN9	P39107	395 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	FMC1	P40491	155 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	EPS1	P40557	701 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	SMK1	P41808	388 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	PSA1	P41940	361 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	RNY1	Q02933	434 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	SKY1	Q03656	742 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	GIS4	Q04233	774 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	CDA1	Q06702	301 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	YOL075C	Q08234	1294 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	CSM4	Q08955	156 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	YRR1	Q12172	810 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	HAL9	Q12180	1030 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	GPM3	Q12326	303 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	POM152	P39685	1337 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	LYS2	P07702	1392 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	CDC8	P00572	216 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	SRV2	P17555	526 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	CNA1	P23287	553 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	CNB1	P25296	175 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	ATG22	P25568	528 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	ADE1	P27616	306 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	GCG1	P32656	232 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	LIP5	P32875	414 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	PTK1	P36002	662 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	YBP1	P38315	674 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	STB5	P38699	743 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	PCF11	P39081	626 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	GDH3	P39708	457 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	PAC11	P40960	533 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	PET130	P47065	347 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	CUE3	P53137	624 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	ERP6	P53198	216 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	YDR476C	Q03362	224 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	ROY1	Q04847	553 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	FMP42	Q04991	504 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	YMR226C	Q05016	267 aa	Known RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	RCL1	Q08096	367 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	SKI7	Q08491	747 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC39	YLR440C	RAX1	Q08760	435 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	YLR053C	Q12026	108 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	SWT1	Q12104	458 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	YOL114C	Q12322	202 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	SNF8	Q12483	233 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	AI5_BETA	Q9ZZX0	354 aa		4.91	□□□□□ -1.62
SEC39	YLR440C	NFT1	P0CE68	1218 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	ARO3	P14843	370 aa	Known RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	ATP12	P22135	325 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	AIM17	P23180	465 aa	Known RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	RRT12	P25381	491 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	YCL049C	P25577	312 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	PER1	P25625	357 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	DAL3	P32459	195 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	AST1	P35183	429 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	STB6	P36085	766 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	AIM29	P36154	155 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	GLY1	P37303	387 aa	Known RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	PPS1	P38148	807 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	FAT1	P38225	669 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	RFS1	P38234	210 aa	Known RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	ICS2	P38284	255 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	PTC7	P38797	343 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	ECM10	P39987	644 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	PDS1	P40316	373 aa	Predicted RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	COS4	P43542	379 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	RPC17	P47076	161 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	ALT2	P52892	507 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	ZPR1	P53303	486 aa	Known RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	GPD1	Q00055	391 aa	Known RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	MUS81	Q04149	632 aa	Predicted RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	PLM2	Q04383	521 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	YDR222W	Q04925	415 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	ATG23	Q06671	453 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	YEH1	Q07804	573 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	LYS21	Q12122	440 aa	Known RBP	4.9	□□□□□ -1.62
SEC39	YLR440C	SFM1	Q12314	213 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	YBL029C-A	Q3E756	94 aa		4.9	□□□□□ -1.62
SEC39	YLR440C	RPL27A	P0C2H6	136 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	RPL27B	P0C2H7	136 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	CDC24	P11433	854 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	GLN4	P13188	809 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 152.9 ms