RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W HAT2P39984 401 aa3.29□□□□□ -1.88
VPS38YLR360W PDS5Q04264 1277 aa3.29□□□□□ -1.88
VPS38YLR360W MFB1Q04922 465 aa3.29□□□□□ -1.88
VPS38YLR360W BUD21Q08492 214 aaPredicted RBP3.29□□□□□ -1.88
VPS38YLR360W RSA1Q08932 381 aa3.29□□□□□ -1.88
VPS38YLR360W OCA4P25366 362 aa3.28□□□□□ -1.88
VPS38YLR360W IMP2'P32351 346 aa3.28□□□□□ -1.88
VPS38YLR360W MRE11P32829 692 aa3.28□□□□□ -1.88
VPS38YLR360W RSM22P36056 628 aa3.28□□□□□ -1.88
VPS38YLR360W ERP2P39704 215 aa3.28□□□□□ -1.88
VPS38YLR360W YEL057CP39983 233 aa3.28□□□□□ -1.88
VPS38YLR360W SPO22P40511 975 aa3.28□□□□□ -1.88
VPS38YLR360W IDP2P41939 412 aa3.28□□□□□ -1.88
VPS38YLR360W GWT1P47026 490 aa3.28□□□□□ -1.88
VPS38YLR360W BOR1P53838 576 aa3.28□□□□□ -1.88
VPS38YLR360W TIM10P87108 93 aa3.28□□□□□ -1.88
VPS38YLR360W YLL056CQ12177 298 aa3.28□□□□□ -1.88
VPS38YLR360W RKM5Q12367 367 aa3.28□□□□□ -1.88
VPS38YLR360W CTF3Q12748 733 aa3.28□□□□□ -1.88
VPS38YLR360W RPL31BP0C2H9 113 aaKnown RBP3.27□□□□□ -1.89
VPS38YLR360W PUT3P25502 979 aaPredicted RBP3.27□□□□□ -1.89
VPS38YLR360W FRE2P36033 711 aa3.27□□□□□ -1.89
VPS38YLR360W MUM2P38236 366 aa3.27□□□□□ -1.89
VPS38YLR360W MET28P40573 187 aa3.27□□□□□ -1.89
VPS38YLR360W PIR3Q03180 325 aa3.27□□□□□ -1.89
VPS38YLR360W IMH1Q06704 911 aaKnown RBP3.27□□□□□ -1.89
VPS38YLR360W YDL007C-AQ2V2Q0 85 aa3.27□□□□□ -1.89
VPS38YLR360W YCL021W-AQ96VH3 125 aa3.27□□□□□ -1.89
VPS38YLR360W YML133CQ03099 1374 aa3.27□□□□□ -1.89
VPS38YLR360W YLL067CQ07888 1374 aa3.27□□□□□ -1.89
VPS38YLR360W YLL066CQ99208 1374 aa3.27□□□□□ -1.89
VPS38YLR360W ARG3P05150 338 aa3.26□□□□□ -1.89
VPS38YLR360W CPR1P14832 162 aaKnown RBP3.26□□□□□ -1.89
VPS38YLR360W FUN19P28003 413 aaPredicted RBP3.26□□□□□ -1.89
VPS38YLR360W ATP11P32453 318 aa3.26□□□□□ -1.89
VPS38YLR360W AVT5P38176 459 aa3.26□□□□□ -1.89
VPS38YLR360W TIF5P38431 405 aaKnown RBP3.26□□□□□ -1.89
VPS38YLR360W SYG1P40528 902 aa3.26□□□□□ -1.89
VPS38YLR360W OCA1P50946 238 aaPredicted RBP3.26□□□□□ -1.89
VPS38YLR360W TLG2Q08144 397 aa3.26□□□□□ -1.89
VPS38YLR360W HNT3Q08702 217 aa3.26□□□□□ -1.89
VPS38YLR360W MED1Q12321 566 aa3.26□□□□□ -1.89
VPS38YLR360W SEC39Q12745 709 aa3.26□□□□□ -1.89
VPS38YLR360W BUB3P26449 341 aa3.25□□□□□ -1.89
VPS38YLR360W YOX1P34161 385 aa3.25□□□□□ -1.89
VPS38YLR360W KEL1P38853 1164 aaKnown RBP3.25□□□□□ -1.89
VPS38YLR360W TWF1P53250 332 aa3.25□□□□□ -1.89
VPS38YLR360W KEL3Q08979 651 aaPredicted RBP3.25□□□□□ -1.89
VPS38YLR360W LPD1P09624 499 aaKnown RBP3.24□□□□□ -1.89
VPS38YLR360W MFT1P33441 392 aaKnown RBP3.24□□□□□ -1.89
VPS38YLR360W PMT1P33775 817 aa3.24□□□□□ -1.89
VPS38YLR360W CMC1P36064 111 aa3.24□□□□□ -1.89
VPS38YLR360W CBP4P37267 147 aa3.24□□□□□ -1.89
VPS38YLR360W ISC1P40015 477 aaKnown RBP3.24□□□□□ -1.89
VPS38YLR360W FAU1P40099 211 aa3.24□□□□□ -1.89
VPS38YLR360W MKT1P40850 830 aaKnown RBP3.24□□□□□ -1.89
VPS38YLR360W ARF3P40994 183 aaRIP-Chip data3.24□□□□□ -1.89not detected
VPS38YLR360W URB2P47108 1174 aa3.24□□□□□ -1.89
VPS38YLR360W MSO1P53604 210 aaKnown RBP3.24□□□□□ -1.89
VPS38YLR360W MRD1Q06106 887 aaKnown RBP3.24□□□□□ -1.89
VPS38YLR360W RIM20Q12033 661 aa3.24□□□□□ -1.89
VPS38YLR360W ATG29Q12092 213 aa3.24□□□□□ -1.89
VPS38YLR360W RRI2Q12348 645 aa3.24□□□□□ -1.89
VPS38YLR360W LEU4P06208 619 aaKnown RBP3.23□□□□□ -1.89
VPS38YLR360W PMR1P13586 950 aa3.23□□□□□ -1.89
VPS38YLR360W GPI10P30777 616 aa3.23□□□□□ -1.89
VPS38YLR360W NDI1P32340 513 aa3.23□□□□□ -1.89
VPS38YLR360W MRP4P32902 394 aa3.23□□□□□ -1.89
VPS38YLR360W VID24P38263 362 aa3.23□□□□□ -1.89
VPS38YLR360W SDS24P38314 527 aa3.23□□□□□ -1.89
VPS38YLR360W YFL067WP43537 175 aa3.23□□□□□ -1.89
VPS38YLR360W YPI1P43587 155 aa3.23□□□□□ -1.89
VPS38YLR360W AVT4P50944 713 aa3.23□□□□□ -1.89
VPS38YLR360W SLG1P54867 378 aa3.23□□□□□ -1.89
VPS38YLR360W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
VPS38YLR360W TOP1P04786 769 aa3.22□□□□□ -1.89
VPS38YLR360W MRP7P12687 371 aa3.22□□□□□ -1.89
VPS38YLR360W IDH2P28241 369 aaKnown RBP3.22□□□□□ -1.89
VPS38YLR360W AFG1P32317 509 aa3.22□□□□□ -1.89
VPS38YLR360W SPG5P42933 373 aa3.22□□□□□ -1.89
VPS38YLR360W YGL108CP53139 140 aa3.22□□□□□ -1.89
VPS38YLR360W CAF40P53829 373 aa3.22□□□□□ -1.89
VPS38YLR360W NOP1P15646 327 aaKnown RBP3.21□□□□□ -1.89
VPS38YLR360W GLC7P32598 312 aaKnown RBP3.21□□□□□ -1.89
VPS38YLR360W YMR147WP40218 223 aaKnown RBP3.21□□□□□ -1.89
VPS38YLR360W GCD10P41814 478 aa3.21□□□□□ -1.89
VPS38YLR360W HXT14P42833 540 aa3.21□□□□□ -1.89
VPS38YLR360W YGR149WP48236 432 aa3.21□□□□□ -1.89
VPS38YLR360W YER078W-AQ3E7A2 54 aa3.21□□□□□ -1.89
VPS38YLR360W MET17P06106 444 aa3.2□□□□□ -1.9
VPS38YLR360W HIP1P06775 603 aa3.2□□□□□ -1.9
VPS38YLR360W YAR066WP0CX18 203 aa3.2□□□□□ -1.9
VPS38YLR360W YHR214WP0CX19 203 aa3.2□□□□□ -1.9
VPS38YLR360W ATP10P18496 279 aa3.2□□□□□ -1.9
VPS38YLR360W RNA14P25298 677 aaKnown RBP3.2□□□□□ -1.9
VPS38YLR360W SPB1P25582 841 aaPredicted RBP3.2□□□□□ -1.9
VPS38YLR360W YCR100CP25606 316 aa3.2□□□□□ -1.9
VPS38YLR360W RAD14P28519 371 aa3.2□□□□□ -1.9
VPS38YLR360W DEG1P31115 442 aaKnown RBP3.2□□□□□ -1.9
VPS38YLR360W NAT2P37293 288 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms