RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C NUP133P36161 1157 aa2.28□□□□□ -2.04
CSF1YLR087C HSL7P38274 827 aa2.28□□□□□ -2.04
CSF1YLR087C SFB3P38810 929 aa2.28□□□□□ -2.04
CSF1YLR087C CWC23P52868 283 aaPredicted RBP2.28□□□□□ -2.04
CSF1YLR087C SLI1P53304 468 aa2.28□□□□□ -2.04
CSF1YLR087C YMR210WQ03649 449 aa2.28□□□□□ -2.04
CSF1YLR087C ILV1P00927 576 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C RPL1AP0CX43 217 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C RPL1BP0CX44 217 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C DAP2P18962 818 aa2.28□□□□□ -2.04
CSF1YLR087C DBP2P24783 546 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C SCJ1P25303 377 aa2.28□□□□□ -2.04
CSF1YLR087C AGP1P25376 633 aa2.28□□□□□ -2.04
CSF1YLR087C PET127P32606 800 aa2.28□□□□□ -2.04
CSF1YLR087C MDJ1P35191 511 aa2.28□□□□□ -2.04
CSF1YLR087C GUA1P38625 525 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C RTR1P40084 226 aaPredicted RBP2.28□□□□□ -2.04
CSF1YLR087C BUR6P40096 142 aa2.28□□□□□ -2.04
CSF1YLR087C HPM1P40481 377 aa2.28□□□□□ -2.04
CSF1YLR087C PMT6P42934 759 aa2.28□□□□□ -2.04
CSF1YLR087C FOL2P51601 243 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C YNL046WP53956 172 aa2.28□□□□□ -2.04
CSF1YLR087C RSM23Q01163 450 aa2.28□□□□□ -2.04
CSF1YLR087C SEN54Q02825 467 aaPredicted RBP2.28□□□□□ -2.04
CSF1YLR087C MTQ2Q03920 221 aaPredicted RBP2.28□□□□□ -2.04
CSF1YLR087C SIZ1Q04195 904 aa2.28□□□□□ -2.04
CSF1YLR087C YMR315WQ04869 349 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C YDL124WQ07551 312 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C NSL1Q12143 216 aa2.28□□□□□ -2.04
CSF1YLR087C NBL1Q3E7Y6 73 aa2.28□□□□□ -2.04
CSF1YLR087C MOD5P07884 428 aa2.28□□□□□ -2.04
CSF1YLR087C RPL31AP0C2H8 113 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C RPL31BP0C2H9 113 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C PRP16P15938 1071 aaPredicted RBP2.28□□□□□ -2.04
CSF1YLR087C CTR86P25355 563 aa2.28□□□□□ -2.04
CSF1YLR087C UBC8P28263 218 aa2.28□□□□□ -2.04
CSF1YLR087C RFS1P38234 210 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C ERG7P38604 731 aa2.28□□□□□ -2.04
CSF1YLR087C PHO90P39535 881 aa2.28□□□□□ -2.04
CSF1YLR087C NPP2P39997 493 aa2.28□□□□□ -2.04
CSF1YLR087C POG1P40473 351 aa2.28□□□□□ -2.04
CSF1YLR087C USE1P53146 245 aa2.28□□□□□ -2.04
CSF1YLR087C ELA1P53861 379 aaPredicted RBP2.28□□□□□ -2.04
CSF1YLR087C DIG2Q03373 323 aaKnown RBP2.28□□□□□ -2.04
CSF1YLR087C RPP1AP05318 106 aaPredicted RBP2.28□□□□□ -2.05
CSF1YLR087C OLE1P21147 510 aaKnown RBP2.28□□□□□ -2.05
CSF1YLR087C IME1P21190 360 aa2.28□□□□□ -2.05
CSF1YLR087C UTR1P21373 530 aa2.28□□□□□ -2.05
CSF1YLR087C PMI40P29952 429 aaKnown RBP2.28□□□□□ -2.05
CSF1YLR087C HBS1P32769 611 aaKnown RBP2.28□□□□□ -2.05
CSF1YLR087C TYE7P33122 291 aaPredicted RBP2.28□□□□□ -2.05
CSF1YLR087C PIN4P34217 668 aaKnown RBP RIP-Chip data2.28□□□□□ -2.05not detected
CSF1YLR087C APM3P38153 483 aa2.28□□□□□ -2.05
CSF1YLR087C STT3P39007 718 aaKnown RBP2.28□□□□□ -2.05
CSF1YLR087C FRT2P39734 528 aa2.28□□□□□ -2.05
CSF1YLR087C YER184CP39961 794 aa2.28□□□□□ -2.05
CSF1YLR087C YMR147WP40218 223 aaKnown RBP2.28□□□□□ -2.05
CSF1YLR087C RNR4P49723 345 aaKnown RBP2.28□□□□□ -2.05
CSF1YLR087C PEX29Q03370 554 aa2.28□□□□□ -2.05
CSF1YLR087C EST2Q06163 884 aa2.28□□□□□ -2.05
CSF1YLR087C TMC1Q08422 150 aaPredicted RBP2.28□□□□□ -2.05
CSF1YLR087C GRE2Q12068 342 aaKnown RBP2.28□□□□□ -2.05
CSF1YLR087C BAG7Q12128 409 aa2.28□□□□□ -2.05
CSF1YLR087C TFC7Q12415 435 aa2.28□□□□□ -2.05
CSF1YLR087C PSF1Q12488 208 aa2.28□□□□□ -2.05
CSF1YLR087C SUS1Q6WNK7 96 aa2.28□□□□□ -2.05
CSF1YLR087C NCP1P16603 691 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C GID7P25569 745 aa2.27□□□□□ -2.05
CSF1YLR087C URA8P38627 578 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C PTK2P47116 818 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C YGL185CP53100 379 aa2.27□□□□□ -2.05
CSF1YLR087C IMO32P53219 342 aa2.27□□□□□ -2.05
CSF1YLR087C MTG1Q03151 367 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C RAD33Q04231 177 aa2.27□□□□□ -2.05
CSF1YLR087C UTP21Q06078 939 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C YEH1Q07804 573 aa2.27□□□□□ -2.05
CSF1YLR087C TCO89Q08921 799 aa2.27□□□□□ -2.05
CSF1YLR087C PGC1Q08959 321 aa2.27□□□□□ -2.05
CSF1YLR087C YDL085C-AQ3E7B7 68 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C FAB1P34756 2278 aa2.27□□□□□ -2.05
CSF1YLR087C SED4P25365 1065 aa2.27□□□□□ -2.05
CSF1YLR087C NAM7P30771 971 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C GSH1P32477 678 aa2.27□□□□□ -2.05
CSF1YLR087C MDL1P33310 695 aa2.27□□□□□ -2.05
CSF1YLR087C PPS1P38148 807 aa2.27□□□□□ -2.05
CSF1YLR087C MMS21P38632 267 aa2.27□□□□□ -2.05
CSF1YLR087C NVJ1P38881 321 aa2.27□□□□□ -2.05
CSF1YLR087C FAA2P39518 744 aa2.27□□□□□ -2.05
CSF1YLR087C CDC40P40968 455 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C HOC1P47124 396 aa2.27□□□□□ -2.05
CSF1YLR087C VPS70P47161 811 aa2.27□□□□□ -2.05
CSF1YLR087C MPA43P53583 542 aaPredicted RBP2.27□□□□□ -2.05
CSF1YLR087C TRS31Q03337 283 aa2.27□□□□□ -2.05
CSF1YLR087C YPL150WQ12152 901 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-HO13535 1793 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-DR5P0C2I2 1755 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-DR6P0C2I3 1755 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-LR2P0C2I5 1755 aa2.27□□□□□ -2.05
CSF1YLR087C TY1B-LR3P0C2I6 1755 aaKnown RBP2.27□□□□□ -2.05
CSF1YLR087C TY1B-PR1P0C2I9 1755 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms