RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C RAD52P06778 471 aaKnown RBP4.42□□□□□ -1.7
SED5YLR026C PMU1P36069 295 aa4.42□□□□□ -1.7
SED5YLR026C YBL029WP38201 376 aa4.42□□□□□ -1.7
SED5YLR026C TIF5P38431 405 aaKnown RBP4.42□□□□□ -1.7
SED5YLR026C YEL068CP39977 110 aa4.42□□□□□ -1.7
SED5YLR026C SHO1P40073 367 aa4.42□□□□□ -1.7
SED5YLR026C YJL132WP47014 750 aa4.42□□□□□ -1.7
SED5YLR026C YMR018WQ04364 514 aa4.42□□□□□ -1.7
SED5YLR026C BNA5Q05979 453 aa4.42□□□□□ -1.7
SED5YLR026C REV1P12689 985 aa4.41□□□□□ -1.7
SED5YLR026C YHR210CP38893 341 aa4.41□□□□□ -1.7
SED5YLR026C CIN4P39110 191 aa4.41□□□□□ -1.7
SED5YLR026C YPI1P43587 155 aa4.41□□□□□ -1.7
SED5YLR026C MRPL51Q06090 140 aaPredicted RBP4.41□□□□□ -1.7
SED5YLR026C YOR365CQ08844 703 aa4.41□□□□□ -1.7
SED5YLR026C YBR126W-AQ8TGU7 68 aa4.41□□□□□ -1.7
SED5YLR026C HSH49Q99181 213 aaPredicted RBP4.41□□□□□ -1.7
SED5YLR026C PEP4P07267 405 aaKnown RBP4.4□□□□□ -1.71
SED5YLR026C TIF3P34167 436 aaKnown RBP4.4□□□□□ -1.71
SED5YLR026C TUL1P36096 758 aa4.4□□□□□ -1.71
SED5YLR026C IDP2P41939 412 aa4.4□□□□□ -1.71
SED5YLR026C YJR154WP47181 346 aa4.4□□□□□ -1.71
SED5YLR026C IPI3P53877 555 aa4.4□□□□□ -1.71
SED5YLR026C NGL3Q03210 505 aa4.4□□□□□ -1.71
SED5YLR026C YKU80Q04437 629 aa4.4□□□□□ -1.71
SED5YLR026C IVY1Q04934 453 aa4.4□□□□□ -1.71
SED5YLR026C FMP40Q08968 688 aaPredicted RBP4.4□□□□□ -1.71
SED5YLR026C TY3B-GQ99315 1547 aa4.4□□□□□ -1.71
SED5YLR026C EST1P17214 699 aaPredicted RBP4.39□□□□□ -1.71
SED5YLR026C ART10P18634 518 aaKnown RBP4.39□□□□□ -1.71
SED5YLR026C SUI2P20459 304 aaKnown RBP4.39□□□□□ -1.71
SED5YLR026C SAC6P32599 642 aaKnown RBP4.39□□□□□ -1.71
SED5YLR026C MUD2P36084 527 aaKnown RBP4.39□□□□□ -1.71
SED5YLR026C DUO1P53168 247 aaKnown RBP4.39□□□□□ -1.71
SED5YLR026C COQ9Q05779 260 aa4.39□□□□□ -1.71
SED5YLR026C YCL021W-AQ96VH3 125 aa4.39□□□□□ -1.71
SED5YLR026C CDC16P09798 840 aa4.38□□□□□ -1.71
SED5YLR026C MCM10P32354 571 aa4.38□□□□□ -1.71
SED5YLR026C YBP1P38315 674 aa4.38□□□□□ -1.71
SED5YLR026C ALG8P40351 577 aa4.38□□□□□ -1.71
SED5YLR026C RPC11Q04307 110 aaPredicted RBP4.38□□□□□ -1.71
SED5YLR026C PHO92Q06390 306 aa4.38□□□□□ -1.71
SED5YLR026C SEC7P11075 2009 aaKnown RBP4.38□□□□□ -1.71
SED5YLR026C SUC2P00724 532 aa4.37□□□□□ -1.71
SED5YLR026C ATR1P13090 542 aa4.37□□□□□ -1.71
SED5YLR026C YCR007CP25354 239 aa4.37□□□□□ -1.71
SED5YLR026C SWH1P35845 1188 aa4.37□□□□□ -1.71
SED5YLR026C YAP3P38749 330 aa4.37□□□□□ -1.71
SED5YLR026C CCT6P39079 546 aa4.37□□□□□ -1.71
SED5YLR026C HAT2P39984 401 aa4.37□□□□□ -1.71
SED5YLR026C IRC15Q02733 499 aa4.37□□□□□ -1.71
SED5YLR026C OPY2Q06810 360 aa4.37□□□□□ -1.71
SED5YLR026C THP1Q08231 455 aa4.37□□□□□ -1.71
SED5YLR026C HUA2Q12134 243 aa4.37□□□□□ -1.71
SED5YLR026C YSP2Q06681 1438 aa4.37□□□□□ -1.71
SED5YLR026C CTF3Q12748 733 aa4.36□□□□□ -1.71
SED5YLR026C TY1B-NL2Q99337 1749 aaKnown RBP4.35□□□□□ -1.71
SED5YLR026C PUT3P25502 979 aaPredicted RBP4.35□□□□□ -1.71
SED5YLR026C SSH4P32343 579 aa4.35□□□□□ -1.71
SED5YLR026C UTR4P32626 227 aa4.35□□□□□ -1.71
SED5YLR026C SHP1P34223 423 aa4.35□□□□□ -1.71
SED5YLR026C LSP1Q12230 341 aaKnown RBP4.35□□□□□ -1.71
SED5YLR026C ELO2P25358 347 aa4.34□□□□□ -1.71
SED5YLR026C TIF4631P39935 952 aaKnown RBP4.34□□□□□ -1.71
SED5YLR026C IMD4P50094 524 aaKnown RBP4.34□□□□□ -1.71
SED5YLR026C TOF2Q02208 771 aa4.34□□□□□ -1.71
SED5YLR026C VPS74Q06385 345 aa4.34□□□□□ -1.71
SED5YLR026C HNT3Q08702 217 aa4.34□□□□□ -1.71
SED5YLR026C NOP58Q12499 511 aaKnown RBP4.34□□□□□ -1.71
SED5YLR026C PMR1P13586 950 aa4.33□□□□□ -1.72
SED5YLR026C FUN19P28003 413 aaPredicted RBP4.33□□□□□ -1.72
SED5YLR026C SEF1P34228 1148 aa4.33□□□□□ -1.72
SED5YLR026C DUG2P38149 878 aa4.33□□□□□ -1.72
SED5YLR026C BNA4P38169 460 aa4.33□□□□□ -1.72
SED5YLR026C TCM62P38228 572 aaKnown RBP4.33□□□□□ -1.72
SED5YLR026C ALG5P40350 334 aa4.33□□□□□ -1.72
SED5YLR026C MSO1P53604 210 aaKnown RBP4.33□□□□□ -1.72
SED5YLR026C YEH1Q07804 573 aa4.33□□□□□ -1.72
SED5YLR026C YPT6Q99260 215 aa4.33□□□□□ -1.72
SED5YLR026C YBT1P32386 1661 aa4.32□□□□□ -1.72
SED5YLR026C NUP188P52593 1655 aaKnown RBP4.32□□□□□ -1.72
SED5YLR026C RNA14P25298 677 aaKnown RBP4.32□□□□□ -1.72
SED5YLR026C MSN2P33748 704 aa4.32□□□□□ -1.72
SED5YLR026C SGN1P40561 250 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SED5YLR026C GWT1P47026 490 aa4.32□□□□□ -1.72
SED5YLR026C AIM22P47051 409 aa4.32□□□□□ -1.72
SED5YLR026C YER078W-AQ3E7A2 54 aa4.32□□□□□ -1.72
SED5YLR026C IML1P47170 1584 aa4.31□□□□□ -1.72
SED5YLR026C ALK1P43633 760 aaKnown RBP4.31□□□□□ -1.72
SED5YLR026C SHE10P53075 577 aa4.31□□□□□ -1.72
SED5YLR026C VID30P53076 958 aa4.31□□□□□ -1.72
SED5YLR026C ZPR1P53303 486 aaKnown RBP4.31□□□□□ -1.72
SED5YLR026C GPI1P53306 609 aa4.31□□□□□ -1.72
SED5YLR026C CFT2Q12102 859 aaPredicted RBP4.31□□□□□ -1.72
SED5YLR026C CPR1P14832 162 aaKnown RBP4.3□□□□□ -1.72
SED5YLR026C EXO70P19658 623 aa4.3□□□□□ -1.72
SED5YLR026C MRPL4P36517 319 aa4.3□□□□□ -1.72
SED5YLR026C MSR1P38714 643 aa4.3□□□□□ -1.72
SED5YLR026C MKT1P40850 830 aaKnown RBP4.3□□□□□ -1.72
SED5YLR026C ADD37Q03233 198 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms