RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C PRP2P20095 876 aaPredicted RBP11.19□□□□□ -0.62
YKR040CYKR040C MLS1P30952 554 aa11.19□□□□□ -0.62
YKR040CYKR040C PET112P33893 541 aa11.19□□□□□ -0.62
YKR040CYKR040C APT2P36973 181 aa11.19□□□□□ -0.62
YKR040CYKR040C ARB1P40024 610 aaKnown RBP11.19□□□□□ -0.62
YKR040CYKR040C TAF6P53040 516 aa11.19□□□□□ -0.62
YKR040CYKR040C YGR053CP53234 283 aa11.19□□□□□ -0.62
YKR040CYKR040C YPR022CQ12139 1133 aa11.19□□□□□ -0.62
YKR040CYKR040C SPS22P25380 463 aa11.18□□□□□ -0.62
YKR040CYKR040C FUN30P31380 1131 aa11.18□□□□□ -0.62
YKR040CYKR040C YRO2P38079 344 aa11.18□□□□□ -0.62
YKR040CYKR040C YBR071WP38243 211 aa11.18□□□□□ -0.62
YKR040CYKR040C BZZ1P38822 633 aa11.18□□□□□ -0.62
YKR040CYKR040C MNL1P38888 796 aa11.18□□□□□ -0.62
YKR040CYKR040C MET18P40469 1032 aa11.18□□□□□ -0.62
YKR040CYKR040C MAD2P40958 196 aa11.18□□□□□ -0.62
YKR040CYKR040C TDA10P42938 290 aa11.18□□□□□ -0.62
YKR040CYKR040C IBA57P47158 497 aa11.18□□□□□ -0.62
YKR040CYKR040C SED5Q01590 340 aa11.18□□□□□ -0.62
YKR040CYKR040C YCL012CQ8J0M4 134 aa11.18□□□□□ -0.62
YKR040CYKR040C BUB2P26448 306 aaPredicted RBP11.17□□□□□ -0.62
YKR040CYKR040C RPC19P28000 142 aaKnown RBP11.17□□□□□ -0.62
YKR040CYKR040C SRB5P32585 307 aa11.17□□□□□ -0.62
YKR040CYKR040C CBP4P37267 147 aa11.17□□□□□ -0.62
YKR040CYKR040C PTC2P39966 464 aaKnown RBP11.17□□□□□ -0.62
YKR040CYKR040C VRG4P40107 337 aa11.17□□□□□ -0.62
YKR040CYKR040C SDH1Q00711 640 aa11.17□□□□□ -0.62
YKR040CYKR040C GIP3Q03016 1276 aa11.17□□□□□ -0.62
YKR040CYKR040C YDL121CQ07541 149 aa11.17□□□□□ -0.62
YKR040CYKR040C TRP3P00937 484 aa11.16□□□□□ -0.62
YKR040CYKR040C YHR112CP38716 378 aa11.16□□□□□ -0.62
YKR040CYKR040C MTG2P38860 518 aa11.16□□□□□ -0.62
YKR040CYKR040C TRM9P49957 279 aa11.16□□□□□ -0.62
YKR040CYKR040C MPS1P54199 764 aa11.16□□□□□ -0.62
YKR040CYKR040C YMR111CQ04461 462 aaPredicted RBP11.16□□□□□ -0.62
YKR040CYKR040C BSC2Q05611 235 aa11.16□□□□□ -0.62
YKR040CYKR040C GIC2Q06648 383 aa11.16□□□□□ -0.62
YKR040CYKR040C GLE1Q12315 538 aa11.16□□□□□ -0.62
YKR040CYKR040C NOT5Q12514 560 aaPredicted RBP11.16□□□□□ -0.62
YKR040CYKR040C HXK2P04807 486 aaKnown RBP11.15□□□□□ -0.62
YKR040CYKR040C CDC5P32562 705 aa11.15□□□□□ -0.62
YKR040CYKR040C HES1P35843 434 aa11.15□□□□□ -0.62
YKR040CYKR040C MRPL15P36523 253 aa11.15□□□□□ -0.62
YKR040CYKR040C ASC1P38011 319 aaKnown RBP11.15□□□□□ -0.62
YKR040CYKR040C STS1P38637 319 aa11.15□□□□□ -0.62
YKR040CYKR040C MRM2P53123 320 aa11.15□□□□□ -0.62
YKR040CYKR040C YNL140CP53910 189 aa11.15□□□□□ -0.62
YKR040CYKR040C MET31Q03081 177 aa11.15□□□□□ -0.62
YKR040CYKR040C NMD4Q12129 218 aa11.15□□□□□ -0.62
YKR040CYKR040C AI4P03878 556 aa11.14□□□□□ -0.63
YKR040CYKR040C GCD2P12754 651 aaPredicted RBP11.14□□□□□ -0.63
YKR040CYKR040C ERG1P32476 496 aaKnown RBP11.14□□□□□ -0.63
YKR040CYKR040C VPS21P36017 210 aaKnown RBP11.14□□□□□ -0.63
YKR040CYKR040C YBR062CP38239 180 aa11.14□□□□□ -0.63
YKR040CYKR040C FTH1P38310 465 aa11.14□□□□□ -0.63
YKR040CYKR040C UBP6P43593 499 aaKnown RBP11.14□□□□□ -0.63
YKR040CYKR040C TRS85P46944 698 aa11.14□□□□□ -0.63
YKR040CYKR040C YNL010WP53981 241 aaKnown RBP11.14□□□□□ -0.63
YKR040CYKR040C MUS81Q04149 632 aaPredicted RBP11.14□□□□□ -0.63
YKR040CYKR040C RSF1Q05043 376 aa11.14□□□□□ -0.63
YKR040CYKR040C GYP1Q08484 637 aa11.14□□□□□ -0.63
YKR040CYKR040C ATG34Q12292 412 aa11.14□□□□□ -0.63
YKR040CYKR040C LEU4P06208 619 aaKnown RBP11.13□□□□□ -0.63
YKR040CYKR040C DST1P07273 309 aa11.13□□□□□ -0.63
YKR040CYKR040C OCA4P25366 362 aa11.13□□□□□ -0.63
YKR040CYKR040C PET127P32606 800 aa11.13□□□□□ -0.63
YKR040CYKR040C MRE11P32829 692 aa11.13□□□□□ -0.63
YKR040CYKR040C CTP1P38152 299 aa11.13□□□□□ -0.63
YKR040CYKR040C HSM3P38348 480 aa11.13□□□□□ -0.63
YKR040CYKR040C YEN1P40028 759 aa11.13□□□□□ -0.63
YKR040CYKR040C FAU1P40099 211 aa11.13□□□□□ -0.63
YKR040CYKR040C YIL086CP40503 102 aa11.13□□□□□ -0.63
YKR040CYKR040C PAC11P40960 533 aa11.13□□□□□ -0.63
YKR040CYKR040C GUS1P46655 708 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
YKR040CYKR040C SDT1P53078 280 aa11.13□□□□□ -0.63
YKR040CYKR040C XYL2Q07993 356 aa11.13□□□□□ -0.63
YKR040CYKR040C RRP40Q08285 240 aaKnown RBP11.13□□□□□ -0.63
YKR040CYKR040C ESA1Q08649 445 aa11.13□□□□□ -0.63
YKR040CYKR040C RUP1Q12242 671 aa11.13□□□□□ -0.63
YKR040CYKR040C FRE7Q12333 620 aa11.13□□□□□ -0.63
YKR040CYKR040C Q0010Q9ZZX9 128 aa11.13□□□□□ -0.63
YKR040CYKR040C DBR1P24309 405 aaKnown RBP11.12□□□□□ -0.63
YKR040CYKR040C MGR1P25573 417 aa11.12□□□□□ -0.63
YKR040CYKR040C MVD1P32377 396 aaKnown RBP11.12□□□□□ -0.63
YKR040CYKR040C LOS1P33418 1100 aaPredicted RBP11.12□□□□□ -0.63
YKR040CYKR040C YCR087C-AP37263 153 aa11.12□□□□□ -0.63
YKR040CYKR040C MEP2P41948 499 aa11.12□□□□□ -0.63
YKR040CYKR040C ELP2P42935 788 aa11.12□□□□□ -0.63
YKR040CYKR040C PMT3P47190 753 aa11.12□□□□□ -0.63
YKR040CYKR040C ASK10P48361 1146 aa11.12□□□□□ -0.63
YKR040CYKR040C REX2P54964 269 aaKnown RBP11.12□□□□□ -0.63
YKR040CYKR040C TRS23Q03784 219 aa11.12□□□□□ -0.63
YKR040CYKR040C SHE9Q04172 456 aa11.12□□□□□ -0.63
YKR040CYKR040C BOP2Q06150 570 aa11.12□□□□□ -0.63
YKR040CYKR040C MMT2Q08970 484 aa11.12□□□□□ -0.63
YKR040CYKR040C YLL054CQ12244 843 aa11.12□□□□□ -0.63
YKR040CYKR040C IRA1P18963 3092 aa11.12□□□□□ -0.63
YKR040CYKR040C MRPL32P25348 183 aa11.11□□□□□ -0.63
YKR040CYKR040C NPP1P25353 742 aa11.11□□□□□ -0.63
YKR040CYKR040C CHA1P25379 360 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms