RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W GLK1P17709 500 aaKnown RBP2.45□□□□□ -2.02
SPE1YKL184W TIF3P34167 436 aaKnown RBP2.45□□□□□ -2.02
SPE1YKL184W YBL059WP34224 193 aa2.45□□□□□ -2.02
SPE1YKL184W CBP4P37267 147 aa2.45□□□□□ -2.02
SPE1YKL184W NDT80P38830 627 aa2.45□□□□□ -2.02
SPE1YKL184W TIF4631P39935 952 aaKnown RBP2.45□□□□□ -2.02
SPE1YKL184W YGR066CP53242 292 aa2.45□□□□□ -2.02
SPE1YKL184W BTN2P53286 410 aa2.45□□□□□ -2.02
SPE1YKL184W CAF40P53829 373 aa2.45□□□□□ -2.02
SPE1YKL184W RPT6Q01939 405 aaKnown RBP2.45□□□□□ -2.02
SPE1YKL184W FIN1Q03898 291 aa2.45□□□□□ -2.02
SPE1YKL184W MED1Q12321 566 aa2.45□□□□□ -2.02
SPE1YKL184W HHF1P02309 103 aaKnown RBP2.44□□□□□ -2.02
SPE1YKL184W SPT15P13393 240 aaKnown RBP2.44□□□□□ -2.02
SPE1YKL184W CRM1P30822 1084 aaKnown RBP2.44□□□□□ -2.02
SPE1YKL184W REG2P38232 338 aa2.44□□□□□ -2.02
SPE1YKL184W POP1P41812 875 aa2.44□□□□□ -2.02
SPE1YKL184W URB2P47108 1174 aa2.44□□□□□ -2.02
SPE1YKL184W IMD4P50094 524 aaKnown RBP2.44□□□□□ -2.02
SPE1YKL184W HEF3P53978 1044 aaKnown RBP2.44□□□□□ -2.02
SPE1YKL184W TIM10P87108 93 aa2.44□□□□□ -2.02
SPE1YKL184W PIR3Q03180 325 aa2.44□□□□□ -2.02
SPE1YKL184W NGL3Q03210 505 aa2.44□□□□□ -2.02
SPE1YKL184W COQ9Q05779 260 aa2.44□□□□□ -2.02
SPE1YKL184W VPS38Q05919 439 aa2.44□□□□□ -2.02
SPE1YKL184W TSR2Q06672 205 aaKnown RBP2.44□□□□□ -2.02
SPE1YKL184W AVL9Q12500 764 aa2.44□□□□□ -2.02
SPE1YKL184W SEM1O94742 89 aa2.43□□□□□ -2.02
SPE1YKL184W SUP35P05453 685 aaKnown RBP2.43□□□□□ -2.02
SPE1YKL184W MET8P15807 274 aa2.43□□□□□ -2.02
SPE1YKL184W NDI1P32340 513 aa2.43□□□□□ -2.02
SPE1YKL184W IMP2'P32351 346 aa2.43□□□□□ -2.02
SPE1YKL184W FRE2P36033 711 aa2.43□□□□□ -2.02
SPE1YKL184W TCD2P36101 447 aaKnown RBP2.43□□□□□ -2.02
SPE1YKL184W JNM1P36224 373 aa2.43□□□□□ -2.02
SPE1YKL184W DRN1P53255 507 aaKnown RBP2.43□□□□□ -2.02
SPE1YKL184W YKU80Q04437 629 aa2.43□□□□□ -2.02
SPE1YKL184W MFB1Q04922 465 aa2.43□□□□□ -2.02
SPE1YKL184W YOR387CQ08910 206 aa2.43□□□□□ -2.02
SPE1YKL184W CFT2Q12102 859 aaPredicted RBP2.43□□□□□ -2.02
SPE1YKL184W RRP12Q12754 1228 aaKnown RBP2.43□□□□□ -2.02
SPE1YKL184W YJR112W-AQ3E743 109 aa2.43□□□□□ -2.02
SPE1YKL184W MES1P00958 751 aaKnown RBP2.42□□□□□ -2.02
SPE1YKL184W COR1P07256 457 aa2.42□□□□□ -2.02
SPE1YKL184W PRP2P20095 876 aaPredicted RBP2.42□□□□□ -2.02
SPE1YKL184W YEL045CP32616 141 aa2.42□□□□□ -2.02
SPE1YKL184W MFT1P33441 392 aaKnown RBP2.42□□□□□ -2.02
SPE1YKL184W MSN2P33748 704 aa2.42□□□□□ -2.02
SPE1YKL184W CCT6P39079 546 aa2.42□□□□□ -2.02
SPE1YKL184W NOC2P39744 710 aaKnown RBP2.42□□□□□ -2.02
SPE1YKL184W DOT5P40553 215 aa2.42□□□□□ -2.02
SPE1YKL184W RMD8P43620 662 aa2.42□□□□□ -2.02
SPE1YKL184W MRX6P48564 524 aa2.42□□□□□ -2.02
SPE1YKL184W CTI6Q08923 506 aa2.42□□□□□ -2.02
SPE1YKL184W RLM1Q12224 676 aa2.42□□□□□ -2.02
SPE1YKL184W YER078W-AQ3E7A2 54 aa2.42□□□□□ -2.02
SPE1YKL184W RAV1P47104 1357 aa2.42□□□□□ -2.02
SPE1YKL184W GCN4P03069 281 aa2.42□□□□□ -2.02
SPE1YKL184W GAL80P04387 435 aa2.42□□□□□ -2.02
SPE1YKL184W HIP1P06775 603 aa2.42□□□□□ -2.02
SPE1YKL184W MRP7P12687 371 aa2.42□□□□□ -2.02
SPE1YKL184W HEM15P16622 393 aa2.42□□□□□ -2.02
SPE1YKL184W NAT2P37293 288 aa2.42□□□□□ -2.02
SPE1YKL184W YBR225WP38321 900 aa2.42□□□□□ -2.02
SPE1YKL184W DED81P38707 554 aaKnown RBP2.42□□□□□ -2.02
SPE1YKL184W MBB1P39534 108 aa2.42□□□□□ -2.02
SPE1YKL184W ESL1P40456 1118 aa2.42□□□□□ -2.02
SPE1YKL184W SDT1P53078 280 aa2.42□□□□□ -2.02
SPE1YKL184W OGG1P53397 376 aaPredicted RBP2.42□□□□□ -2.02
SPE1YKL184W PBA1Q05778 276 aa2.42□□□□□ -2.02
SPE1YKL184W ESA1Q08649 445 aa2.42□□□□□ -2.02
SPE1YKL184W LEU4P06208 619 aaKnown RBP2.41□□□□□ -2.02
SPE1YKL184W CBS1P14066 229 aa2.41□□□□□ -2.02
SPE1YKL184W BUB3P26449 341 aa2.41□□□□□ -2.02
SPE1YKL184W SDH3P33421 198 aa2.41□□□□□ -2.02
SPE1YKL184W SRO77P38163 1010 aa2.41□□□□□ -2.02
SPE1YKL184W RRT2P38332 387 aa2.41□□□□□ -2.02
SPE1YKL184W FAA2P39518 744 aa2.41□□□□□ -2.02
SPE1YKL184W PRE5P40302 234 aaKnown RBP2.41□□□□□ -2.02
SPE1YKL184W YGR210CP42942 411 aa2.41□□□□□ -2.02
SPE1YKL184W ARE2P53629 642 aaKnown RBP2.41□□□□□ -2.02
SPE1YKL184W MRPL19P53875 158 aa2.41□□□□□ -2.02
SPE1YKL184W MDG1P53885 366 aa2.41□□□□□ -2.02
SPE1YKL184W YLR108CQ12259 485 aa2.41□□□□□ -2.02
SPE1YKL184W DFR1P07807 211 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SPE1YKL184W YAR066WP0CX18 203 aa2.4□□□□□ -2.03
SPE1YKL184W YHR214WP0CX19 203 aa2.4□□□□□ -2.03
SPE1YKL184W OLE1P21147 510 aaKnown RBP2.4□□□□□ -2.03
SPE1YKL184W NAM9P27929 486 aa2.4□□□□□ -2.03
SPE1YKL184W FAU1P40099 211 aa2.4□□□□□ -2.03
SPE1YKL184W AIM22P47051 409 aa2.4□□□□□ -2.03
SPE1YKL184W IBD2P53892 351 aa2.4□□□□□ -2.03
SPE1YKL184W ARK1P53974 638 aa2.4□□□□□ -2.03
SPE1YKL184W ELP3Q02908 557 aaKnown RBP2.4□□□□□ -2.03
SPE1YKL184W KEL3Q08979 651 aaPredicted RBP2.4□□□□□ -2.03
SPE1YKL184W FOB1O13329 566 aa2.39□□□□□ -2.03
SPE1YKL184W ARG3P05150 338 aa2.39□□□□□ -2.03
SPE1YKL184W MET17P06106 444 aa2.39□□□□□ -2.03
SPE1YKL184W CDC31P06704 161 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W FUR1P18562 216 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms