RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W MSC1Q03104 513 aa6.48□□□□□ -1.37
SNU71YGR013W MRPL1Q04599 285 aa6.48□□□□□ -1.37
SNU71YGR013W YFH1Q07540 174 aa6.48□□□□□ -1.37
SNU71YGR013W CRT10Q08226 957 aa6.48□□□□□ -1.37
SNU71YGR013W SEC3P33332 1336 aaKnown RBP6.48□□□□□ -1.37
SNU71YGR013W GAL7P08431 366 aa6.47□□□□□ -1.37
SNU71YGR013W PUT4P15380 627 aa6.47□□□□□ -1.37
SNU71YGR013W LST4P34239 828 aa6.47□□□□□ -1.37
SNU71YGR013W ADE17P38009 592 aaKnown RBP6.47□□□□□ -1.37
SNU71YGR013W OPT1P40897 799 aa6.47□□□□□ -1.37
SNU71YGR013W PTR3P43606 678 aa6.47□□□□□ -1.37
SNU71YGR013W VPS20Q04272 221 aa6.47□□□□□ -1.37
SNU71YGR013W TEN1Q07921 160 aa6.47□□□□□ -1.37
SNU71YGR013W STE3P06783 470 aa6.47□□□□□ -1.37
SNU71YGR013W YKR073CP36153 106 aa6.47□□□□□ -1.37
SNU71YGR013W ICS2P38284 255 aa6.47□□□□□ -1.37
SNU71YGR013W SAP1P39955 897 aaKnown RBP6.47□□□□□ -1.37
SNU71YGR013W LAS21P40367 830 aa6.47□□□□□ -1.37
SNU71YGR013W VHS2P40463 436 aa6.47□□□□□ -1.37
SNU71YGR013W UTP6Q02354 440 aaKnown RBP6.47□□□□□ -1.37
SNU71YGR013W BOS1P25385 244 aa6.46□□□□□ -1.38
SNU71YGR013W SKN7P38889 622 aa6.46□□□□□ -1.38
SNU71YGR013W GIP4P39732 760 aa6.46□□□□□ -1.38
SNU71YGR013W YGR266WP53326 701 aa6.46□□□□□ -1.38
SNU71YGR013W DCS1Q06151 350 aa6.46□□□□□ -1.38
SNU71YGR013W MRH1Q12117 320 aaPredicted RBP6.46□□□□□ -1.38
SNU71YGR013W VAM3Q12241 283 aa6.46□□□□□ -1.38
SNU71YGR013W SFG1Q12507 346 aa6.46□□□□□ -1.38
SNU71YGR013W LAM4P38800 1345 aa6.46□□□□□ -1.38
SNU71YGR013W CBP1P07252 654 aa6.45□□□□□ -1.38
SNU71YGR013W SRV2P17555 526 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W AIM22P47051 409 aa6.45□□□□□ -1.38
SNU71YGR013W NUP84P52891 726 aa6.45□□□□□ -1.38
SNU71YGR013W RMD9P53140 646 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W EGD1Q02642 157 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W ECM18Q04623 453 aa6.45□□□□□ -1.38
SNU71YGR013W SLK19Q08581 821 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W KRS1P15180 591 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W HIR2P32480 875 aa6.45□□□□□ -1.38
SNU71YGR013W TSC10P38342 320 aa6.45□□□□□ -1.38
SNU71YGR013W SMC2P38989 1170 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W COG2P53271 262 aa6.45□□□□□ -1.38
SNU71YGR013W PLM2Q04383 521 aa6.45□□□□□ -1.38
SNU71YGR013W KAP95Q06142 861 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W GSH2Q08220 491 aa6.45□□□□□ -1.38
SNU71YGR013W APL5Q08951 932 aaKnown RBP6.45□□□□□ -1.38
SNU71YGR013W MED2Q12124 431 aa6.45□□□□□ -1.38
SNU71YGR013W YPR053CQ6Q5F3 151 aa6.45□□□□□ -1.38
SNU71YGR013W TY3B-IQ7LHG5 1498 aaKnown RBP6.44□□□□□ -1.38
SNU71YGR013W CBP2P03874 630 aaPredicted RBP6.44□□□□□ -1.38
SNU71YGR013W SPS4P09937 338 aa6.44□□□□□ -1.38
SNU71YGR013W RNR3P21672 869 aaKnown RBP6.44□□□□□ -1.38
SNU71YGR013W NDI1P32340 513 aa6.44□□□□□ -1.38
SNU71YGR013W YUH1P35127 236 aa6.44□□□□□ -1.38
SNU71YGR013W ARA1P38115 344 aa6.44□□□□□ -1.38
SNU71YGR013W HSM3P38348 480 aa6.44□□□□□ -1.38
SNU71YGR013W YHL017WP38745 532 aa6.44□□□□□ -1.38
SNU71YGR013W ASG1P40467 964 aa6.44□□□□□ -1.38
SNU71YGR013W RPA34P47006 233 aaPredicted RBP6.44□□□□□ -1.38
SNU71YGR013W RRP46P53256 223 aaPredicted RBP6.44□□□□□ -1.38
SNU71YGR013W COQ6P53318 479 aa6.44□□□□□ -1.38
SNU71YGR013W COP1P53622 1201 aaKnown RBP6.44□□□□□ -1.38
SNU71YGR013W OCA2P53949 197 aa6.44□□□□□ -1.38
SNU71YGR013W RRT8Q08219 342 aa6.44□□□□□ -1.38
SNU71YGR013W APC5Q08683 685 aa6.44□□□□□ -1.38
SNU71YGR013W MTR10Q99189 972 aa6.44□□□□□ -1.38
SNU71YGR013W CAR1P00812 333 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W SCH9P11792 824 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W HOM2P13663 365 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W GEX1P25596 615 aa6.43□□□□□ -1.38
SNU71YGR013W RAD14P28519 371 aa6.43□□□□□ -1.38
SNU71YGR013W RPL32P38061 130 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W SPT8P38915 602 aa6.43□□□□□ -1.38
SNU71YGR013W BFR1P38934 470 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
SNU71YGR013W YGL108CP53139 140 aa6.43□□□□□ -1.38
SNU71YGR013W TMA10Q06177 86 aa6.43□□□□□ -1.38
SNU71YGR013W DIS3Q08162 1001 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W PCL8Q08966 492 aa6.43□□□□□ -1.38
SNU71YGR013W NDJ1Q12366 352 aa6.43□□□□□ -1.38
SNU71YGR013W RPS13P05756 151 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W ILV5P06168 395 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W GAC1P28006 793 aa6.43□□□□□ -1.38
SNU71YGR013W ASC1P38011 319 aaKnown RBP6.43□□□□□ -1.38
SNU71YGR013W ATG27P46989 271 aa6.43□□□□□ -1.38
SNU71YGR013W CYK3Q07533 885 aa6.43□□□□□ -1.38
SNU71YGR013W MED7Q08278 222 aa6.43□□□□□ -1.38
SNU71YGR013W RPS10AQ08745 105 aaPredicted RBP6.43□□□□□ -1.38
SNU71YGR013W SPE2P21182 396 aa6.42□□□□□ -1.38
SNU71YGR013W RDS1P25611 832 aa6.42□□□□□ -1.38
SNU71YGR013W MMS4P38257 691 aa6.42□□□□□ -1.38
SNU71YGR013W MSG5P38590 489 aa6.42□□□□□ -1.38
SNU71YGR013W YIP5P53108 310 aa6.42□□□□□ -1.38
SNU71YGR013W PRM1P53835 661 aa6.42□□□□□ -1.38
SNU71YGR013W ATG4P53867 494 aa6.42□□□□□ -1.38
SNU71YGR013W KTR5P53966 522 aaPredicted RBP6.42□□□□□ -1.38
SNU71YGR013W HRD3Q05787 833 aa6.42□□□□□ -1.38
SNU71YGR013W CUR1Q06469 252 aa6.42□□□□□ -1.38
SNU71YGR013W NDL1Q06568 189 aa6.42□□□□□ -1.38
SNU71YGR013W YLR413WQ06689 675 aa6.42□□□□□ -1.38
SNU71YGR013W ETT1Q08421 412 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms